Gene Information

Name : nucD2
Accession : NP_458702.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : putative lysozyme
Function : -
COG functional category : R : General function prediction only
COG ID : COG3772
EC number : -
Position : 4489020 - 4489490 bp
Length : 471 bp
Strand : -
Note : Similar to Serratia marcescens putative phage lysozyme NucD TR:Q54419 (EMBL:U11698) (179 aa) fasta scores: E(): 0, 60.6% id in 155 aa and to Serratia marcescens phage lysozyme RegB TR:Q54423 (EMBL:U31763) (179 aa) fasta scores: E(): 0, 59.6% id in 166 aa;

DNA sequence :
GTGCTGGCTATCGCAGCCACGCTGCCCGGATTTCAGTCGCTTCATACCTCCGTTGAGGGGCTGAAACTGATCGCCGATTA
CGAGGGATGCCGCCTGCAGCCTTATCAGTGTAGCGCGGGCGTCTGGACTGACGGGATCGGCAATACGTCCGGTGTGGTGC
CTGGAAAAACCATCACGGAACGGCAGGCGGCGCAGGGACTTATCACCAATGTGCTGCGCGTGGAGCGGGCGCTGGAAAAA
TGTGTGGTGCAGCCGATGCCGCAAAAGGTCTATGACGCGGTGGTGTCGTTTGCTTTCAACGTGGGCACCGGCAACGCCTG
CAGCTCCACGCTGGTTAAGTTGCTGAACCAGCGGCGCTGGGCGGATGCCTGCCATCAGCTGCCGCGCTGGGTATATGTCA
AAGGTGTGTTTAATCAGGGGCTGGACAACCGCCGCGCGCGGGAAATGGCCTGGTGCTTAAAAGGAGCCTAA

Protein sequence :
MLAIAATLPGFQSLHTSVEGLKLIADYEGCRLQPYQCSAGVWTDGIGNTSGVVPGKTITERQAAQGLITNVLRVERALEK
CVVQPMPQKVYDAVVSFAFNVGTGNACSSTLVKLLNQRRWADACHQLPRWVYVKGVFNQGLDNRRAREMAWCLKGA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
nucD2 NP_458702.1 putative lysozyme Not tested SPI-7 Protein 2e-69 100
nucD NP_807909.1 lysozyme Not tested SPI-7 Protein 2e-69 100