Gene Information

Name : sopE
Accession : NP_458691.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : invasion-associated secreted protein.
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4481801 - 4482523 bp
Length : 723 bp
Strand : +
Note : Similar to Salmonella typhimurium invasion-associated secreted protein SopE TR:O52623 (EMBL:AF043239) (240 aa) fasta scores: E(): 0, 99.2% id in 240 aa

DNA sequence : 
GTGACAAAAATAACTTTATCTCCCCAGAATTTTAGAATCCAAAAACAGGAAACCACACTACTAAAAGAAAAATCAACCGA
GAAAAATTCTTTAGCAAAAAGTATTCTCGCAGTAAAAAATCACTTCATCGAATTAAGGTCAAAATTATCGGAACGTTTTA
TTTCGCATAAGAACACTGAGTCTTCTGCAACACACTTTCACCGAGGAAGCGCATCTGAGGGCCGGGCAGTGTTGACAAAT
AAAGTCGTTAAAGATTTTATGCTTCAAACGCTCAATGATATAGATATTAGAGGTAGTGCGAGTAAAGACCCCGCATACGC
CAGCCAGACCCGTGAAGCTATACTATCGGCAGTTTACAGCAAGAATAAAGATCAGTGTTGTAATTTGCTCATCAGCAAAG
GGATCAACATAGCGCCTTTTCTTCAGGAAATTGGCGAAGCAGCGAAAAATGCAGGTCTGCCCGGAACAACCAAAAATGAC
GTTTTTACGCCAAGCGGCGCAGGGGCCAATCCTTTTATAACTCCGTTGATTTCATCAGCAAACAGTAAGTATCCACGTAT
GTTTATCAATCAACATCAGCAGGCATCCTTTAAAATCTATGCGGAGAAGATCATTATGACAGAAGTTGCACCACTGTTTA
ATGAGTGTGCTATGCCGACTCCACAGCAATTCCAACTGATACTAGAAAACATTGCTAATAAATATATACAATACACTCCC
TGA

Protein sequence : 
MTKITLSPQNFRIQKQETTLLKEKSTEKNSLAKSILAVKNHFIELRSKLSERFISHKNTESSATHFHRGSASEGRAVLTN
KVVKDFMLQTLNDIDIRGSASKDPAYASQTREAILSAVYSKNKDQCCNLLISKGINIAPFLQEIGEAAKNAGLPGTTKND
VFTPSGAGANPFITPLISSANSKYPRMFINQHQQASFKIYAEKIIMTEVAPLFNECAMPTPQQFQLILENIANKYIQYTP

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. Virulence SPI-7 Protein 4e-110 100
sopE NP_807899.1 invasion-associated secreted protein Virulence SPI-7 Protein 4e-110 100

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sopE NP_458691.1 invasion-associated secreted protein. VFG0467 Protein 2e-82 70