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Name : samB Accession : NP_458681.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : UV protection protein Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : - Position : 4472479 - 4473753 bp Length : 1275 bp Strand : - Note : Similar to Salmonella typhimurium cryptic 60-MDa plasmid SamB protein SW:SAMB_SALTY (P23832) (424 aa) fasta scores: E(): 0, 89.6% id in 423 aa, and to Shigella flexneri ImpB impB TR:Q9ZA91 (EMBL:AF079316) (423 aa) fasta scores: E(): 0, 71.7% id in 421 aa; DNA sequence : ATGTTCGCCCTGGCTGACGTCAACAGCTTCTACGCGAGCTGTGAAAAAGTATTTCGTCCCGATTTACGTAATACACCTGT TGTGGTGCTCAGTAACAACGATGGATGTGTTATCGCGCGTTCAAAAGAAGCGAAGCAACTGGGCATTAAAATGGGGGTTC CGTGGTTTCAACTGAAAACAACCGAATTTCCTGTACCTGTCGTTGCGTTCTCGAGTAACTACGAACTCTACGCGTCGATG TCGAACCGTGTTATGGCGCATCTCGAAGAACTGGCACCTCGCGTTGAGCAGTATTCTATCGACGAAATGTTTCTTGATGT GCGCAATATTGACAGTTGTATCGATTTTGAAGACTTCGGCCGGCAGTTGCGCGAGCATGTACATTCAGGAACCGGACTGA CCATCGGAGTTGGGATGGGACCGACCAAGACACTGGCAAAAAGCGCACAATGGGCGTCTAAGGAATGGCGGCAGTTTGAG GGCGTGCTTGCTCTGACTTCAGGCAATCCAAAGCGAACGGAGAAACTATTGTCACTGCAGCCAGTAGACGAAATCTGGGG GGTTGGTCGCCGGATCTCGAAGAAACTGCACACAATGGGGATAACAACTGCACTGCAGCTGGCGCGCGCGAACCCAACAT TTATCAGGAAAAATTTCAGTGTTGTTCTCGAGAGAACTGTCCGTGAACTGAACGGGGAAAGCTGTATTTCACTGGAGGAG GCTCCGCCACCCAAGCAGCAGATTGTCTGCAGCCGATCCTTTGGGGAGCGCGTCACAACATATGAAGCCATGCGCCAGGC AGTCTGTCAGTATGCTGAGCGTGCAGCTGAAAAGCTGCGCGGCGAGCGGCAATTCTGCAGACATGTTGCTGTATTTGTGA AGACGTCACCGTTCGCTGTGAACGAACCGTATTACGGGAATGTGGCCAGTGAGAAACTGACGACTCCCACGCAGGATACC AGGGACATCATAGCCGCAGCGGTGAAAGCACTGGATCGGATCTGGGTGAAAGGGCATAGATATGCAAAAGCGGGTTGCAT GCTCAATGATTTCACACCAACCGGGATTTCTCAGTTAAATCTTTTTGATGAAGTGCAGCCGCACGAACGAAGTGAGCAGT TGATGAAAGTTCTCGACAGTATCAACCATTCAGGTATGGGAAAAGTGTGGTTTGCCGGAAGAGGGATAGCCCCTGAGTGG CAGATGAAAAGAGAGCTACTCTCTCCAGCTTATACCACTCGCTGGGCTGAATTACCTGTTGCACGATTGCGCTGA Protein sequence : MFALADVNSFYASCEKVFRPDLRNTPVVVLSNNDGCVIARSKEAKQLGIKMGVPWFQLKTTEFPVPVVAFSSNYELYASM SNRVMAHLEELAPRVEQYSIDEMFLDVRNIDSCIDFEDFGRQLREHVHSGTGLTIGVGMGPTKTLAKSAQWASKEWRQFE GVLALTSGNPKRTEKLLSLQPVDEIWGVGRRISKKLHTMGITTALQLARANPTFIRKNFSVVLERTVRELNGESCISLEE APPPKQQIVCSRSFGERVTTYEAMRQAVCQYAERAAEKLRGERQFCRHVAVFVKTSPFAVNEPYYGNVASEKLTTPTQDT RDIIAAAVKALDRIWVKGHRYAKAGCMLNDFTPTGISQLNLFDEVQPHERSEQLMKVLDSINHSGMGKVWFAGRGIAPEW QMKRELLSPAYTTRWAELPVARLR |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 0.0 | 100 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 0.0 | 100 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 1e-81 | 46 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 2e-65 | 44 |
