Gene Information

Name : STY4583
Accession : NP_458667.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : conserved hypothetical protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG3969
EC number : -
Position : 4459393 - 4460640 bp
Length : 1248 bp
Strand : +
Note : Similar to Escherichia coli hypothetical protein YbdN SW:YBDN_ECOLI (P77216) (406 aa) fasta scores: E(): 0, 57.9% id in 404 aa and to Pseudomonas aeruginosa conserved hypothetical protein TR:AAG05515 (EMBL:AE004640) (408 aa) fasta scores: E(): 2.5e-31, 41

DNA sequence :
ATGTCAGATAACGTCATTATGCAACGTAATCAAATACAGAAGATCAGAACCGGGGAGGATGTGCTGTCTGCGGTTACAGG
CCGTGTGGAGTGGATATTTGATACCTTTTCTCAGGTTTGTCTGTCTTTTTCAGGTGGAAAAGACTCCACCGTTCTGTTTC
ATATCGCCGCCACAATAGCCCGCAGGAAACACCGGCGTTTCTCTGTCCTTTTTATTGACTGGGAAGCCCAGTATCAGTGC
ACGATTGAGCATGTTCAGAAAATGAAGGATCTCTACAGTGATGTGACGGAGACGTTTTTCTGGGTGGCTCTCCCGCTGAC
GACGGTAAATGGTGTTTCACAGTTTCAGCCAGAATGGGTCTGCTGGGAGCCCGATGTGGAGTGGGTGCGTCAGCCGCCGA
CAGATGCCATTACTGATACGACGTATTTTCCTTTTTACCGTTACGCCATGACATTTGAAGAGTTTGTCCCGGCATTTTCG
ACTTGGTTCACGGGCAATCAGTGTGGAGTGGCCATACTGACTGGCGTTCGTGCAGATGAGTCCCTTAACAGGTTTATAGG
CCTTACCAGCCAGCGAAAGCTTCGTTATGCCGATGACAAACCCTGGACCACCGCCTCTCCTGAGGGGTTTTATTACACGA
TGTGTCCTCTGTATGACTGGAAAGCCCGGGACATCTGGATTTACCATGCCCGTACGGGCGCCATTTACAACCCGCTGTAT
GACCTGATGTACAGAGCCGGCGTCCCCCTGCGGAGTATGCGGGTCTGTGAACCTTTTGGCCCCGAACAGCGCCGCGGTCT
GTGGCTTTATCATGTACTGGAGCCTGAGACCTGGGCGCGAATGTGTGCCCGCGTCTCCGGAGCGGCCAGCGGGGCCATTT
ATGCTAATGAAAGTGGCGCTTATTTTGCCCTGCGCAAACGCATCTCCAGACCAGCACATCATACCTGGCGCAGCTATGCC
ATGTTTCTTCTTGATGTCATGCCACAAAAAACAGCCGAGCATTACCGGAACAAGATAGCGGTATACCTGCGCTGGTATCA
GACGCACGGTTATCCGGAAGATATTCCGGATGAACAGGAGAATGACCTGGGCAGCAGGGATATTCCCTCCTGGCGTAGGA
TATGCAAGACACTGATTAAAAATGACTTCTGGTGCCGGACCTTATCTTTCAGTCCTAATAAGCCCCGGCATTACGAACGT
TACCTGGAGCGTATGAAACAAAGGAGGAAGGAATGGGGGATATTGTAA

Protein sequence :
MSDNVIMQRNQIQKIRTGEDVLSAVTGRVEWIFDTFSQVCLSFSGGKDSTVLFHIAATIARRKHRRFSVLFIDWEAQYQC
TIEHVQKMKDLYSDVTETFFWVALPLTTVNGVSQFQPEWVCWEPDVEWVRQPPTDAITDTTYFPFYRYAMTFEEFVPAFS
TWFTGNQCGVAILTGVRADESLNRFIGLTSQRKLRYADDKPWTTASPEGFYYTMCPLYDWKARDIWIYHARTGAIYNPLY
DLMYRAGVPLRSMRVCEPFGPEQRRGLWLYHVLEPETWARMCARVSGAASGAIYANESGAYFALRKRISRPAHHTWRSYA
MFLLDVMPQKTAEHYRNKIAVYLRWYQTHGYPEDIPDEQENDLGSRDIPSWRRICKTLIKNDFWCRTLSFSPNKPRHYER
YLERMKQRRKEWGIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY4583 NP_458667.1 conserved hypothetical protein Not tested SPI-7 Protein 0.0 100
t4277 NP_807875.1 hypothetical protein Not tested SPI-7 Protein 0.0 99
ibrA ADD91735.1 putative phosphoadenosine phosphosulfate reductase IbrA Not tested PAI-I AL862 Protein 4e-176 87
Z1643 AAQ19139.1 putative phosphoadenosine phosphosulfate reductase Not tested PAI I CL3 Protein 1e-176 87
ORF_31 AAZ04441.1 conserved hypothetical protein Not tested PAI I APEC-O1 Protein 3e-177 87
APECO1_3502 YP_854308.1 hypothetical protein Not tested PAI I APEC-O1 Protein 4e-177 87
c5209 NP_757057.1 hypothetical protein Not tested PAI II CFT073 Protein 4e-177 87
z1203 CAD33763.1 Z1203 protein Not tested PAI I 536 Protein 1e-175 87
Z1203 NP_286738.1 hypothetical protein Not tested TAI Protein 4e-176 86
Z1643 NP_287146.1 hypothetical protein Not tested TAI Protein 4e-176 86

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY4583 NP_458667.1 conserved hypothetical protein VFG1504 Protein 6e-176 87