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Name : STY4573 Accession : NP_458658.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : hypothetical protein Function : - COG functional category : U : Intracellular trafficking, secretion and vesicular transport COG ID : COG3451 EC number : - Position : 4450338 - 4452761 bp Length : 2424 bp Strand : + Note : Weakly similar in parts to Helicobacter pylori J99 DNA transfer protein virb4_2 TR:Q9ZKL8 (EMBL:AE001521) (475 aa) fasta scores: E(): 0.28, 18.6% id in 354 aa DNA sequence : ATGAATCGGTTAGCCAGTTACATCAAACCGCATGCTCAGAGGACGGCATTTACGAAGGCCTGGCTGGCTGAAACAGAACA GCATCTGCGAAATATCACCCGGCCGGAAGGTTTGTTCACTGATTCACTTGTCACCGGGGTTCCCTGGCGGGGACAAAATC GTTCCGTCAGGATGGTGGTATATCGATACCTGCCAGCGAATTACAAAGATGATTCGCCGGTTGCCGCTCTCAACCAGGTT TGTGAGCGCCTGACTTCAGCCTTATCTGCAGCCGGCGTTCTGAGTGTCCGACAGAATGGCGAGCAGATACATCGATGGTT GTTACGTCACTTCAATCCTGAGCCCGACTGGATAGACAAAGATACGCTTTACCGGGAGGCTCGTTATTATGATGATGCAC CTGATTCATTGCCTCTTGGCAATGATTTCACTGAGACGTTGTGGTTTAACCCTCCACGTTCTGATACCCGAAATGGTGTG TGGTGGTTTGATAATGTGGCGCATCGTGCCGTTCCTGTTGAAACATTACGTCGCCCTCCGGGACCCGGTCATCTGACGGG GGAGGTTAAGCGTGGCGACAATATTAATACTCTGATGGATTTATTGCCTGAGGGCACAATGGTATCGCTCACTATTGTGG CGCAGGCTCAGGACACGCTGGAAGCCGGGTTTGACACGCTGGGTAAAAATGCAATAGGGCAGAACACGGAATCCAGGCGG ACCCGTAGTGATGTGGAGCAGGTGAAGAGTTTGCTGGGCATGCGTCACAAACTTTATCGTGCATCGATAACTTTTTTGAT GCGTGCACCTGATGTCAGTGAGCTGAATAAAAAAATACAGCAACTTACCGCTACATTGCTGACTGCGGGGCTCCAGCCCA CGAAACCTGAATACGAAGTGGCGCCCCTGAATGACTATTTGCGAGCGCTTCCTATGTGTTTTAACCCGCAACTGGATAAA AAAAACTGGTATACCCGCCTGACCTGGGTTCAGCATCTGGCTGGATTGCTTCCCGTGACCGGTCGCAGCCAGGGAACCGG ACACCCCGGGTTTAGTTTTTTTAACCGTGGCGGAGAACTGTTGTCTTTTGATCCCTTAAATAGTCTGGACAGAACGCAGA ATGCTCACCTGTTGCTTTTTGGTCCGACCGGGGCGGGTAAATCAGCCACCTTATGTAGTGCGTTATCACAGTTAATGGCC GTTCATCGTCCACGCCTCTTTATTGCCGAAGCCGGCAACAGTTTTGGTTTGCTGGCGGAGTATTTCCGGGGGCTGGGACT GAGCGTAAATGTACTGAGTATCAAACCTGGCTGCGGTATTTCTTTACCGATGTTTGCTGATGCTCATTCCTTAATGCGAG TAGATCCAAAGAAAAACGTGGTTTCTGAGGAAGCTCTACCTGAGCTGGAGCCAGCCAATACCGACAGCGCAGAAGATGAA AGTGAAGAGCGTGACATTCTTGGCGAAATGGAAATTGCAGCCCGGATGATGATCACCGGTGGCGAGAAGCGGGAGGAGGA ACGTCTTACCCGGGCTGACCGCGGTCTTATTCGTGAAGCTATCATGATGGCGGCGGAGAAAACATATCAGGACGGACATC AGATGCTGGCTGAGGATTTACAGGCTGCCCTGTGGAATATCTCACGTGATAATTCCATTGGTGCAAATGGCGAGCCTATG CGGAATCAGTCCCGTCGCGATCGTGCTGCTGAGATGGCAGAAGCCATGGCCATGTTCACTCAGGGATTTGAGGGAGAGTT ATTCAACCGTCCGGGAACACCATGGCCAGAGGCTGATGTCACACTGATCGATTTAGGTCATCTGGCACGTGAAGGCTATG GTGCACAAATGGCGCTGGCGATGGTCTCTTTAATTAACACGATTAACAATATCGCCGAACGTGACCAGGGAACAGCCCGG GATATTGTGGCCGTATTTGATGAAGCCCATATTTCCACGACGAATCCTTTGTTGTCGCCCTATATGACCAAGGTTGTGAA AATGTGGCGAAAACTGGGGGCATGGCTGTGGCTGGCGACACAGAACCTCGAGGATTTTCCTGATATTGCGCAGAAAATGC TGAACATGGCTGAATGGTGGTTGTGCCTGGTTATGCCTCCCGATGAGGTGGAGCAGATTGCCCGTTTCAAAACCCTCAGC GAGGAGCAAAAAGTTATTTTGCGATCAGCCAGTAAGCTCAAAAACTGTTATACCGAGGGCGTCGTTTTATCAAAGCAGGT TGAGGCACTGTTCCGGGTTGTGCCTCCCAGTCTGTATCTCGCCCTGGGGATGACTGAAAAAGAGGAAAAAGCGGAACGTC AGCGGCTGATGCGAGAGTATCAGTGCAGTGAGCTTGAGGCAGCGATCCGGGTGGCCCGCAGGCTGGATGAGGCACGGGGT TTTTGTCCACAAAAAGCGGCCTGA Protein sequence : MNRLASYIKPHAQRTAFTKAWLAETEQHLRNITRPEGLFTDSLVTGVPWRGQNRSVRMVVYRYLPANYKDDSPVAALNQV CERLTSALSAAGVLSVRQNGEQIHRWLLRHFNPEPDWIDKDTLYREARYYDDAPDSLPLGNDFTETLWFNPPRSDTRNGV WWFDNVAHRAVPVETLRRPPGPGHLTGEVKRGDNINTLMDLLPEGTMVSLTIVAQAQDTLEAGFDTLGKNAIGQNTESRR TRSDVEQVKSLLGMRHKLYRASITFLMRAPDVSELNKKIQQLTATLLTAGLQPTKPEYEVAPLNDYLRALPMCFNPQLDK KNWYTRLTWVQHLAGLLPVTGRSQGTGHPGFSFFNRGGELLSFDPLNSLDRTQNAHLLLFGPTGAGKSATLCSALSQLMA VHRPRLFIAEAGNSFGLLAEYFRGLGLSVNVLSIKPGCGISLPMFADAHSLMRVDPKKNVVSEEALPELEPANTDSAEDE SEERDILGEMEIAARMMITGGEKREEERLTRADRGLIREAIMMAAEKTYQDGHQMLAEDLQAALWNISRDNSIGANGEPM RNQSRRDRAAEMAEAMAMFTQGFEGELFNRPGTPWPEADVTLIDLGHLAREGYGAQMALAMVSLINTINNIAERDQGTAR DIVAVFDEAHISTTNPLLSPYMTKVVKMWRKLGAWLWLATQNLEDFPDIAQKMLNMAEWWLCLVMPPDEVEQIARFKTLS EEQKVILRSASKLKNCYTEGVVLSKQVEALFRVVPPSLYLALGMTEKEEKAERQRLMREYQCSELEAAIRVARRLDEARG FCPQKAA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4573 | NP_458658.1 | hypothetical protein | Not tested | SPI-7 | Protein | 0.0 | 100 |
| PMI2576 | YP_002152295.1 | hypothetical protein | Not tested | Not named | Protein | 0.0 | 68 |
| YpsIP31758_3705 | YP_001402659.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 68 |
| YE3482 | YP_001007641.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 67 |
| api39 | CAF28513.1 | hypothetical protein | Not tested | YAPI | Protein | 0.0 | 67 |
| ORF C47 | AAN62141.1 | hypothetical protein | Not tested | PAGI-2(C) | Protein | 0.0 | 52 |
| ORF SG57 | AAN62279.1 | hypothetical protein | Not tested | PAGI-3(SG) | Protein | 0.0 | 52 |
| unnamed | ABR13362.1 | hypothetical protein | Not tested | PAGI-5 | Protein | 8e-175 | 50 |
| virB4 | CAI36125.1 | VirB4 component | Not tested | PPHGI-1 | Protein | 1e-174 | 50 |
| Pmu_03070 | YP_005176206.1 | conjugative transfer ATPase TraC-like, PFL family | Not tested | ICEPmu1 | Protein | 3e-172 | 49 |
| RL022 | AAP84149.1 | conserved hypothetical protein | Not tested | PAPI-1 | Protein | 5e-173 | 49 |
| EXA33 | ABD94642.1 | conserved hypothetical protein | Not tested | ExoU island A | Protein | 1e-173 | 49 |
