Gene Information

Name : pilS
Accession : NP_458635.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : prepilin
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 4431907 - 4432542 bp
Length : 636 bp
Strand : +
Note : Previously sequenced Salmonella typhi PilS protein TR:Q9ZIU9 (EMBL:AF000001) (206 aa) fasta scores: E(): 0, 100.0% id in 206 aa. Also similar to Escherichia coli plasmid IncI1 R64 type IV prepilin pilS TR:O88170 (EMBL:AB007463) (204 aa) fasta scores: E():

DNA sequence : 
ATGTTAAGCAATTCAATGAAAAATGAAACAGAGGGAAAGATGATGAATGAGGTATCAACATTAAATCCATGCAACAGGCC
TGACCGGGGAATGTCGGCAGATGCCGGTGCCACTGCACTGTTTATTCTGGTGATCATTGGGGTGATAGCCGCGGCGGTCT
GGTCGATGTGGGGTAAAAAGGATGCGGGTACGGAGCTGACAAACTATCAGACCCTGGCCACGAACACCATTGGCATGATG
AAAGGCGTTGACGGTTATGCTTTTACCAGTGGCGCTAAAATGACCGACACGTTAATTCAGGCCGGGGCGGCAAAAGGGAT
GACGGTCAGTGGAGACCCTGCTTCCGGTTCCGCGACACTGTGGAACTCATGGGGTGGCCAGATTGTGGTGGCGCCGGATA
CAGCGGGGGGAACCGGATTTAATAATGGGTTCACCATTACCACAAACAAAGTTCCGCAATCTGCCTGCGTATCCATTTCA
ACAGGTATGAGCCGTTCAGGCGGCACGTCCGGTATTAAAATAAACGGCAATAACCACACCGATGCGAAAGTAACGGCAGA
AATCGCGAGCAGTGAATGCACTGCAGATAATGGCCGGACCGGTACCAATACGCTGGTTTTTAACTACAACGGCTGA

Protein sequence : 
MLSNSMKNETEGKMMNEVSTLNPCNRPDRGMSADAGATALFILVIIGVIAAAVWSMWGKKDAGTELTNYQTLATNTIGMM
KGVDGYAFTSGAKMTDTLIQAGAAKGMTVSGDPASGSATLWNSWGGQIVVAPDTAGGTGFNNGFTITTNKVPQSACVSIS
TGMSRSGGTSGIKINGNNHTDAKVTAEIASSECTADNGRTGTNTLVFNYNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
pilS NP_458635.1 prepilin Virulence SPI-7 Protein 1e-70 100
pilS NP_807846.1 prepilin Virulence SPI-7 Protein 1e-70 100
pilS AAC98887.1 PilS Virulence SPI-7 Protein 9e-69 100
YE3500 YP_001007661.1 putative type IV prepilin Virulence YAPI Protein 4e-22 50
pilS YP_001402683.1 type IV pilus biogenesis protein Virulence YAPI Protein 8e-23 49
pilS CAF28492.1 putative major pilin subunit Virulence YAPI Protein 5e-23 49

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
pilS NP_458635.1 prepilin VFG2315 Protein 1e-22 50