|
Name : STY4522 Accession : NP_458617.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : DNA helicase Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0305 EC number : - Position : 4410683 - 4412047 bp Length : 1365 bp Strand : + Note : Similar to Bacteriophage P1 Ban helicase TR:O80281 (EMBL:AJ011592) (453 aa) fasta scores: E(): 0, 50.0% id in 440 aa and to Escherichia coli replicative DNA helicase Dnab SW:DNAB_ECOLI (P03005) (471 aa) fasta scores: E(): 0, 49.9% id in 443 aa DNA sequence : ATGAGCCATAAATCTGTTTCTGCAGTATCCATGCTGTTTAATGTCGGAGCTGAAACCGGTGTTCTGGGCGGACTGATGCT CGATAACGACCGCTGGGATGAAATTGCGCCGCTTCTGAATTCCGGAGATTTTTATTATGGCCAGCATCAGATCATTTTTC GGGAGATAGAACGGTTGGTCAGTGCTGGCCTGCCCATTGACCTGATAACCCTGTCCGAATCCATGGAGCGAAAAGATCTG CTGGAGCGGTGCGGGGGGGTCGCTTATCTGGCTGAACTGTCAAAAAACACGCCCAGCGCCGCCAATATCGTTGCTTATGC CGAAATTGTGCGCGAGTACAGTCGTAAGCGACGGCTGGTTAAGCTGGGGCATGAGCTACATCAACTGGCCTCAGTCGGCG ATGCGGATATACCCGGTCTGATTGAAAAGGCCGAAAAGCAGTTATTTAGTCTGGCTCAGCAGGCCTGTGACCCCGACATT TGTCTGAGCGTAACGACTCAGGTCGCTGACACGGTCAGCTGGCTGGAATCGGTCAGTGGGGGAAGCGGTGTGACCGGTAC AGCGACAGGTTTTGCTGAACTGGATGAGAAAACCTGTGGCTGGCAGGACGGTGACCTGATTTTACTGGGTGCCCGGCCAT CAATGGGGAAAACGGCAGAAGCACTGAAACATGCCGTTGCTGCGCTGGAAGGCAGTCCCGGCAAGACCGTTCAGTTCTAC AGCATAGAGATGCCAACCCAGCAGCTGATAATGCGTCTGCTTTCAATGCTGGCCAGAGTGCCCTTCGATAACCTGCGCAA AGGTCTGCTGAGCGAAGGGCAGTGGAGTTTACTTGCGGATGCCGTAGCAAAACTGACCTCCTGGGAAGGACGTTTGCTGA TAGACGATACCAGTTATCAGACGCCTTCCACGTTACGTATCAGCGCGCGGCGTAATGTGCGTAAATACGGTCAGCCCTCA CTTATTCTTGTTGATTATCTTCAGTTAATGAGTTGTCCTGGCCGGGAGAACCGCACTCAGGAAATTCAGGAGATTTCCCG TTCGCTCAAGTCACTGGCCAAAGAGATAAGGTGCCCTGTGGCAGCTTTATCCCAGCTCAATCGCAGCGTTGAACAGCGTC AGGATAAACGTCCGATGGTCAGTGACCTTCGGGATTCCGGCTCACTGGAGCAGGATGCGGATGTCATCATGTTCCTGTAC CGCGATGAAGTTTATAACGAGCACTCCCCGGATAGAGGCATAGCTGAAATCATTCTGGGTAAGCAACGTCAGGGGCCGCT GGGCACTGTCAAAGTTCGCTTTGAGGGGGAGTATATGCGCTTCTCGGAGTATCACCTTGGTTATGGGGAGGTGAGCTATG GCTAA Protein sequence : MSHKSVSAVSMLFNVGAETGVLGGLMLDNDRWDEIAPLLNSGDFYYGQHQIIFREIERLVSAGLPIDLITLSESMERKDL LERCGGVAYLAELSKNTPSAANIVAYAEIVREYSRKRRLVKLGHELHQLASVGDADIPGLIEKAEKQLFSLAQQACDPDI CLSVTTQVADTVSWLESVSGGSGVTGTATGFAELDEKTCGWQDGDLILLGARPSMGKTAEALKHAVAALEGSPGKTVQFY SIEMPTQQLIMRLLSMLARVPFDNLRKGLLSEGQWSLLADAVAKLTSWEGRLLIDDTSYQTPSTLRISARRNVRKYGQPS LILVDYLQLMSCPGRENRTQEIQEISRSLKSLAKEIRCPVAALSQLNRSVEQRQDKRPMVSDLRDSGSLEQDADVIMFLY RDEVYNEHSPDRGIAEIILGKQRQGPLGTVKVRFEGEYMRFSEYHLGYGEVSYG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4522 | NP_458617.1 | DNA helicase | Not tested | SPI-7 | Protein | 0.0 | 100 |
| t4227 | NP_807829.1 | DNA helicase | Not tested | SPI-7 | Protein | 0.0 | 100 |
| PMI2640 | YP_002152342.1 | DNA helicase | Not tested | Not named | Protein | 6e-109 | 59 |
| api2 | CAF28476.1 | putative DNA binding protein with DNA-dependent ATPase activity | Not tested | YAPI | Protein | 7e-114 | 57 |
| dnaB2 | YP_001402701.1 | replicative DNA helicase | Not tested | YAPI | Protein | 7e-114 | 57 |
| dnaB2 | YP_001007676.1 | putative DNA helicase | Not tested | YAPI | Protein | 3e-113 | 55 |
| unnamed | ABR13456.1 | replicative DNA helicase | Not tested | PAGI-5 | Protein | 4e-93 | 49 |
| dnaB1 | YP_005176258.1 | replicative DNA helicase | Not tested | ICEPmu1 | Protein | 9e-79 | 48 |
| dnaB | CAI36044.1 | replicative DNA helicase DnaB | Not tested | PPHGI-1 | Protein | 6e-81 | 48 |
