Gene Information

Name : STY4492
Accession : NP_458592.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Resistance
Product : putative membrane protein
Function : -
COG functional category : R : General function prediction only
COG ID : COG2194
EC number : -
Position : 4379502 - 4381145 bp
Length : 1644 bp
Strand : -
Note : Similar to Salmonella typhimurium hypothetical 61.6 kDa protein in basS/pmrA-adiY intergenic region YjdB SW:YJDB_SALTY (P36555) (547 aa) fasta scores: E(): 0, 99.6% id in 547 aa, and to Escherichia coli hypothetical 61.7 kDa protein in basS-adiY intergeni

DNA sequence :
ATGTTAAAGCGCTTTCTTAAAAGACCTGTTCTTGGGCAAATCGCCTGGCTTCTGCTTTTTTCCTTTTATATTGCCGTCTG
CCTGAACATTGCGTTCTACAAGCAGGTACTACAAGACCTACCGTTAAACTCGCTGCGCAATGTGCTGGTGTTTATTTCCA
TGCCGGTCGTCGCGTTTAGCGTGGTCAATAGTGTGCTGACGCTGGCCTCATTTATTTGGCTAAACCGACTGCTGGCCTGC
ATTTTTATTCTGGTCGGCGCTGCCGCGCAGTATTTTATTTTGACTTACGGCATCATCATCGATCGCTCCATGATCGCCAA
TATGATGGATACCACGCCCGCGGAAACTTTTGCTCTGATGACGCCGCAAATGGTGCTGACGCTGGGATTAAGCGGCGTTC
TGGCAGCCGTGATTGCCTTCTGGGTCAAAATCCGTCCGGCGACGCCGCGCTTACGGAGCGGACTTTACCGCCTGGCCAGC
GTCCTGATCTCTATTTTATTAGTTATTCTGGTCGCCGCCTTTTTCTATAAAGATTACGCCTCGCTATTTCGAAATAATAA
ACAGTTGATCAAAGCGTTAAGCCCATCGAACAGTATTGTCGCCAGTTGGTCATGGTATTCGCATCAACGGCTGGCGAATT
TGCCGCTGGTACGCATTGGCGAGGATGCCCATCGCAATCCATTAATGCTGAAAGGCGATCGCAAAAACCTGACGATTCTC
ATCGTTGGCGAAACCTCGCGCGGCGATGATTTCTCTCTTGGCGGCTATCCGCGCGACACCAATCCGCGGCTGGCGAAAGA
CGATGTGATCTACTTCCCGCATACCACCTCTTGCGGTACGGCGACCGCGATCTCCGTTCCCTGCATGTTTTCTGATATGC
CGCGCAAACATTATGACGAAGAGCTGGCGCATCACCAGGAAGGGCTACTGGATATTATCCAGCGCGCGGGGATTAACGTA
CTGTGGAATGATAATGACGGCGGCTGTAAAGGCGCATGCGATCGCGTTCCGCATCAAAATGTCACCGAGCTAAACCTGCC
CGGACAATGTATCGACGGCGAGTGCTACGATGAAGTGTTATTTCACGGTCTGGAAGACTATATCGACCATTTGAAAGGCG
ATGGCGTTATTGTACTGCATACCATCGGCAGCCACGGCCCAACCTATTACAACCGTTATCCACCGCAGTTTAAAAAATTT
ACCCCAACCTGTGACACTAACGAAATTCAGAACTGTTCCCAACAGCAGTTGATCAACACCTATGATAATACCGTGCTGTA
CGTGGACTATATTGTAGATAAAGCCATTAACCTGCTGAAATCTCACCAGGATAAATTCACCACCAGCCTGGTCTATCTTT
CCGATCACGGCGAATCATTGGGTGAAAATGGCGTTTATTTACACGGTTTGCCGTATTCCATTGCGCCGGATACGCAAAAA
CATGTCCCGATGCTCATTTGGCTTTCTAAAGATTATCAACAGCGTTATCAGGTGGATCAGGCCTGCCTGCAAAAACGGGC
GAGCACGCTGGATTATTCACAGGACAATCTTTTCTCAACCATGCTGGGATTAACCGGCGTACAAACGACGTATTACCAGG
CCGCAGATGATATTCTGCAACCGTGCAGGAGACTAAGCGAATGA

Protein sequence :
MLKRFLKRPVLGQIAWLLLFSFYIAVCLNIAFYKQVLQDLPLNSLRNVLVFISMPVVAFSVVNSVLTLASFIWLNRLLAC
IFILVGAAAQYFILTYGIIIDRSMIANMMDTTPAETFALMTPQMVLTLGLSGVLAAVIAFWVKIRPATPRLRSGLYRLAS
VLISILLVILVAAFFYKDYASLFRNNKQLIKALSPSNSIVASWSWYSHQRLANLPLVRIGEDAHRNPLMLKGDRKNLTIL
IVGETSRGDDFSLGGYPRDTNPRLAKDDVIYFPHTTSCGTATAISVPCMFSDMPRKHYDEELAHHQEGLLDIIQRAGINV
LWNDNDGGCKGACDRVPHQNVTELNLPGQCIDGECYDEVLFHGLEDYIDHLKGDGVIVLHTIGSHGPTYYNRYPPQFKKF
TPTCDTNEIQNCSQQQLINTYDNTVLYVDYIVDKAINLLKSHQDKFTTSLVYLSDHGESLGENGVYLHGLPYSIAPDTQK
HVPMLIWLSKDYQQRYQVDQACLQKRASTLDYSQDNLFSTMLGLTGVQTTYYQAADDILQPCRRLSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
Z1140 NP_286675.1 hypothetical protein Not tested TAI Protein 9e-91 42
Z1579 NP_287083.1 hypothetical protein Not tested TAI Protein 9e-91 42

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY4492 NP_458592.1 putative membrane protein BAC0485 Protein 5e-158 60