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Name : soxS Accession : NP_458563.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Resistance Product : regulatory protein SoxS Function : - COG functional category : K : Transcription COG ID : COG2207 EC number : - Position : 4349095 - 4349418 bp Length : 324 bp Strand : - Note : Orthologue of E. coli soxS (SOXS_ECOLI); Fasta hit to SOXS_ECOLI (106 aa), 94% identity in 106 aa overlap DNA sequence : ATGTCGCATCAGCAGATAATTCAGACCCTTATCGAATGGATTGATGAACATATCAACCAACCGCTAAACATTGATGTGGT GGCAAAAAAATCGGGTTACTCCAAGTGGTATTTGCAGCGGATGTTTCGTACGGTAACGCATCAAACATTAGGCGAGTATA TTCGCCAGCGCCGTCTCCTGTTAGCGGCCGTTGAGCTACGAACGACCGAGCGCCCGATTTTTGATATCGCGATGGACCTG GGCTATGTATCGCAGCAAACCTTCTCGCGTGTATTCCGCCGCGAGTTCGATCGCACTCCCAGCGATTACCGTCACCGCCT GTAG Protein sequence : MSHQQIIQTLIEWIDEHINQPLNIDVVAKKSGYSKWYLQRMFRTVTHQTLGEYIRQRRLLLAAVELRTTERPIFDIAMDL GYVSQQTFSRVFRREFDRTPSDYRHRL |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| soxS | YP_219131.1 | DNA-binding transcriptional regulator SoxS | Not tested | SPI-4 | Protein | 2e-46 | 99 |
| tetD | AAL08447.1 | putative transcriptional regulator TetD | Not tested | SRL | Protein | 6e-21 | 49 |
| tetD | AEA34665.1 | tetracycline resistance protein D | Not tested | Not named | Protein | 6e-21 | 49 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | NP_458563.1 | regulatory protein SoxS | CP001138.1.gene4488. | Protein | 6e-47 | 99 |
| soxS | NP_458563.1 | regulatory protein SoxS | BAC0371 | Protein | 9e-46 | 95 |
| soxS | NP_458563.1 | regulatory protein SoxS | NC_002695.1.914293.p | Protein | 9e-46 | 95 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP000034.1.gene4505. | Protein | 2e-45 | 94 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP001918.1.gene327.p | Protein | 5e-45 | 94 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP000647.1.gene4499. | Protein | 3e-44 | 90 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP001138.1.gene612.p | Protein | 4e-25 | 50 |
| soxS | NP_458563.1 | regulatory protein SoxS | NC_010558.1.6276025. | Protein | 3e-21 | 49 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP000647.1.gene1624. | Protein | 1e-19 | 43 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP001918.1.gene2033. | Protein | 5e-20 | 43 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP001138.1.gene1637. | Protein | 7e-20 | 42 |
| soxS | NP_458563.1 | regulatory protein SoxS | BAC0560 | Protein | 7e-20 | 42 |
| soxS | NP_458563.1 | regulatory protein SoxS | NC_002695.1.917339.p | Protein | 7e-20 | 42 |
| soxS | NP_458563.1 | regulatory protein SoxS | CP000034.1.gene1596. | Protein | 6e-20 | 42 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| soxS | NP_458563.1 | regulatory protein SoxS | VFG0585 | Protein | 6e-47 | 99 |
| soxS | NP_458563.1 | regulatory protein SoxS | VFG1038 | Protein | 2e-21 | 49 |
