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Name : STY4457 Accession : NP_458557.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : putative type-I secretion protein Function : - COG functional category : V : Defense mechanisms COG ID : COG1566 EC number : - Position : 4326304 - 4327581 bp Length : 1278 bp Strand : + Note : Similar to several putative type I membrane transport proteins including: Serratia marcescens LipC , involved in the extracellular secretion of lipase, TR:Q54457 (EMBL:D49826) (443 aa) fasta scores: E(): 8.4e-10, 23.0% id in 434 aa, Erwinia chrysanthemi p DNA sequence : ATGAATAGAAGACAAAGCGATCATCTCATGATGATAATTATTTCTTTGACGATCTTAATTATTATCCTTACCTACTTTAT AGAAATTAATTCAGTGGTTCATGGTCAGGGTGTTATCACTACTAAAGATAATGCTCAGTTAATATCTCTTTCTAAAGGAG GGACGATACAAGATATTTATGTGGCCGAGGGGGATACTGTAAAAAAAGGAGAACTCCTTGCAAAGGTCGTTAACTTTGAT CTGCAAAAAGAATATCAAAGGTATAGAACTCAAAAAGGGTATCTGGATAAAGATGTTAACGAAATATCTTTCATTCTTGA TAAAGAAAATGAGAGTGGATTGATTACCCTGGATGGCACCCGTTCTTTAAGCAACAAAGAGGTAAAAGCGAATATTGAAT TAGTGCATAGTCAGATAAGAGCTAAAGAGTTAAAAAAAACCTCTCTTGATTCTGAGATTAGCGGATTACAAGAGAAGCTA AGTTCGAAAGAAAAAGAACTAGCATTGCTTGCCGAAGAAATAAATATTCTTTCTCCACTGGTAAAAAAAGGAATTAGCCC ATATACCAATTTTCTTAACAAGAAACAGGCGTATATAAAAGTTAAGTCTGAAATTAATGATATTGAAAGTAGCATCACTT TAAAAAAAGATGATATTGAGCTGGTTGTTAATGATATTGAGGCGCTTAATAATGAATTGCGATTATCTTTATCTAAAATA ATATCTAAAAATCTTCAGGAACTTGAGGTTGTTAACTCTACATTAAAAGTAATAGAGAAGCAGATAAATGAGGAGGATAT CTATTCACCGGTTGACGGTGTAATTTATAAAATCAATAAAAGTGCCACTACTCATGGTGGTGTGATTCAGGCGGCGGACT TACTTTTTGAAATAAAACCAAAAGTAAGGACTATGCTGGCCGATGTGAAAATACTACCAAAATACCGTGACCAAATATAT GTAGATGAAGCCGTTAAGCTAGATGTCCAGTCAATTATTCAACCAAAGATAAAATCGTATAATGCGACTATCGATAATAT TAGCCCTGACTCTTATGAGGAAAATACCGGAGGAACAATTCAGCGTTATTATAAAGTAATTATTGCATTCGATGTTAATG AAGATGATTTACGGTGGTTAAAACCAGGTATGACTGTTGACGCCAGTGTAATTACCGGAAAACACAGCATTATGGAATAC CTGTTATCTCCTTTGATGAAAGGCGTGGACAAAGCCTTTTCAGAACCAGTTAATACTAAACGATTAGATACACCTTGA Protein sequence : MNRRQSDHLMMIIISLTILIIILTYFIEINSVVHGQGVITTKDNAQLISLSKGGTIQDIYVAEGDTVKKGELLAKVVNFD LQKEYQRYRTQKGYLDKDVNEISFILDKENESGLITLDGTRSLSNKEVKANIELVHSQIRAKELKKTSLDSEISGLQEKL SSKEKELALLAEEINILSPLVKKGISPYTNFLNKKQAYIKVKSEINDIESSITLKKDDIELVVNDIEALNNELRLSLSKI ISKNLQELEVVNSTLKVIEKQINEEDIYSPVDGVIYKINKSATTHGGVIQAADLLFEIKPKVRTMLADVKILPKYRDQIY VDEAVKLDVQSIIQPKIKSYNATIDNISPDSYEENTGGTIQRYYKVIIAFDVNEDDLRWLKPGMTVDASVITGKHSIMEY LLSPLMKGVDKAFSEPVNTKRLDTP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4457 | NP_458557.1 | putative type-I secretion protein | Not tested | SPI-4 | Protein | 1e-175 | 100 |
| SC4139 | YP_219126.1 | membrane permease, cation efflux pump | Not tested | SPI-4 | Protein | 8e-175 | 99 |
| STM4260 | NP_463125.1 | cation efflux pump | Not tested | SPI-4 | Protein | 8e-175 | 99 |
| spi4_D | AAC26642.1 | HLYD family secretion protein | Virulence | SPI-4 | Protein | 6e-175 | 99 |
| siiD | CAE11796.1 | putative type-I secretion protein, putative inner membrane component | Virulence | SPI-4 | Protein | 6e-175 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STY4457 | NP_458557.1 | putative type-I secretion protein | VFG0580 | Protein | 3e-175 | 99 |
