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Name : STY4456 Accession : NP_458556.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : putative type-I secretion protein Function : - COG functional category : M : Cell wall/membrane/envelope biogenesis COG ID : COG1538 EC number : - Position : 4325000 - 4326307 bp Length : 1308 bp Strand : + Note : Similar to several putative type I membrane transport proteins including: Vibrio cholerae outer membrane protein TolC TR:Q9K2Y1 (EMBL:AE004313) (438 aa) fasta scores: E(): 2.2e-12, 20.4% id in 442 aa, Neisseria meningitidis putative periplasmic type I sec DNA sequence : ATGAAGATTAAGATGTTTTTTCTGACGACTGCTTTTATTACACAAAGCACATACGCCAGCGAGCTTCCGGTCATTCCTCT AAGAGATTTAGTTAATGCCGCATTAACGCATCAGCCCTCTGTTGCTGTTTCATATTATGAGACTGAAAAGAAAAACAGTG ACTTAGATCTTTCACGGGCAGCACTTTATCCTACCCTGGATCTAACCTCTGGCCTTAATAATAACAGAAAGGAGTCGTCA GGTACCGAGAGAAACGTTGAAAATAAGGTATCTTTATCATACCGAATAACGGATTTTGGAGTGAGGGGGGCTAATATCAG GAAATCTGAATACGAAAGAGATAATAGTAAAACTGACTATGAAAAAACAAAGAATATAGTGTCTCAGGAGGTTGTGACAA CCTATTACAACATCAGTAAATATCGTGAAATGATTGATGGCGTAAATCTGGAGAAAGAGTTTTATAAAAAGATGCTGGAA ACTTTTTCGCTACTGGTATCTTCCGGTGTAGCTATGCAATCTGATATGCGTAAAGTACAAGTATCTATCGATGCATTAAA TACCAGAAGTATTATGTATCAGTCGATGCTGGATGATGAAATGTATAAAATGCAGAATATGACTGGTCTGAATTTATCAC CAGATCAGATTCAAAGCGATGAAAAATTCAACCTCTTCAAAAAATATATCTTTGTCGAAAGCCCTGAAAAACTTATGGAC ATGGTGATGAAATACAACGATGACTATAAGATGCTTGTCAATACCCGAAAAGCTGCGACCGAAGATATTAATGCCGCAAA ATCATCCTATTTTCCGACTGTAGATCTCGTTTCCAGCTATGTACAGAATAATCCGAGCGGTAGTGCCAAAAAAAGTGATT ATGAAGATGAATTTAAAACGGGTATCAATGTCAGTTTCAACATTTTTAATGGGTTTAGAAATGCAGCCCAGGAAAGAAAA ATGGTGGCAAGTTACTCGCAGGCTAAGCTGCAAATTGACGATTTCTTGATTAAAACTCGTTATAACATTGATTCACAACT TTCAAAATACACCGCTGCAAAAGAGACTTACTCAGTGGCGGAACGTTCACATACAAACGCGTTACAGCTTACTGAATTAT ATGAGCAGGAGTTTCAGTTAGGGCAAAAAAGTTTGCTTGATTTAATTTCAAGCCGTAATGAAGCATTTCAGGCATATGTA AGCATGATCGACAGCAAATATAGCCTGTATATTTTAAAGCTACAGCAACTCTCATTGATTTTTCATTTAATGGATTATTT AAAAAGTGAGTTAAATGTAATGAAATGA Protein sequence : MKIKMFFLTTAFITQSTYASELPVIPLRDLVNAALTHQPSVAVSYYETEKKNSDLDLSRAALYPTLDLTSGLNNNRKESS GTERNVENKVSLSYRITDFGVRGANIRKSEYERDNSKTDYEKTKNIVSQEVVTTYYNISKYREMIDGVNLEKEFYKKMLE TFSLLVSSGVAMQSDMRKVQVSIDALNTRSIMYQSMLDDEMYKMQNMTGLNLSPDQIQSDEKFNLFKKYIFVESPEKLMD MVMKYNDDYKMLVNTRKAATEDINAAKSSYFPTVDLVSSYVQNNPSGSAKKSDYEDEFKTGINVSFNIFNGFRNAAQERK MVASYSQAKLQIDDFLIKTRYNIDSQLSKYTAAKETYSVAERSHTNALQLTELYEQEFQLGQKSLLDLISSRNEAFQAYV SMIDSKYSLYILKLQQLSLIFHLMDYLKSELNVMK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| STY4456 | NP_458556.1 | putative type-I secretion protein | Not tested | SPI-4 | Protein | 0.0 | 100 |
| siiC | CAE11795.1 | putative type-I secretion protein, putative outer membrane component | Virulence | SPI-4 | Protein | 0.0 | 99 |
| SC4138 | YP_219125.1 | ABC transporter outer membrane protein | Not tested | SPI-4 | Protein | 0.0 | 99 |
| STM4259 | NP_463124.1 | ABC exporter outer membrane component | Not tested | SPI-4 | Protein | 0.0 | 99 |
| spi4_C | AAC26641.1 | ABC exporter outer membrane component homolog | Virulence | SPI-4 | Protein | 0.0 | 98 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STY4456 | NP_458556.1 | putative type-I secretion protein | VFG0579 | Protein | 0.0 | 99 |
