Gene Information

Name : STY4288
Accession : NP_458396.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : conserved hypothetical protein
Function : -
COG functional category : S : Function unknown
COG ID : COG5464
EC number : -
Position : 4162727 - 4163653 bp
Length : 927 bp
Strand : -
Note : Similar to Escherichia coli hypothetical 34.9 kDa protein in glpC-ais intergenic region SW:YFAD_ECOLI (P37014) (299 aa) fasta scores: E(): 0, 63.7% id in 303 aa, and to Escherichia coli hypothetical 34.2 kDa protein in folX-hisP intergenic region SW:YFCI_

DNA sequence :
ATGGCGACCTCAACAACATCCACGCCGCATGACGCGGTATTCAAACAGTTTTTATGCCACCCCGATACTGCACGGGATTT
TTTGGAAATCCATCTTCCGTCGACATTACGTCAAATCTGTAATCTGAATACGTTACGGCTGGAGTCCGGTAGCTTTATTG
AAGAGGATTTACGCCCCCATTATTCCGATATCCTTTGGTCGCTGGAAACAAGTGAAGGTGACGGTTACATTTACGTGGTT
ATTGAACATCAGAGTACGCCGGACGCGCATATGGCATTTCGGCTGATGCGTTACGCAATGGCTGCAATGCAACGGCACCT
GGAGGCCGGGCATAAGACGTTGCCATTAGTGGTGCCAATGCTGTTTTACCACGGAAACCGAAGCCCGTATCCGTTCTCAT
TATGCTGGCTGGATGAATTTGCCGACCCGGTGATGGCGCGTAAGCTATACGCCACCGCCTTTCCTCTGGTCGATATTACG
GTCGTGCCGGACGACGAGATTATGCGGCACCGACGGGTCGCGCTGCTGGAACTCATACAAAAACACATCCGCCAGCGTGA
TCTGATGGGGCTTGTCGAACAGCTGGTCGCCCTGCTGGTTAAGGGATACGCTAATGACACCCAGCTTCAAAGTCTGTTTA
ATTACATGATGCACACTGGCGACGCCGCGCGCTTCAATACGTTTATCCGCCAGGTGGCTATGCGTATCCCACAGCATAAG
GAGAAGATCATGACTATCGCAGAAAGATTACGTCAGGAAGGACATCGTAACGGGTTACAGAAAGGGCTACAACAAGGCAA
ACAGGAAGGCCAACGGCTCGCCGCATTGCGCATTGCCCGCTCCATGCTAAACGATGGTTTCGATCGCGATACTGTGCTTA
GGGTTACCGGGCTGGCGCCTGCCGATCTGGCGTCTGAAAGCCATTAA

Protein sequence :
MATSTTSTPHDAVFKQFLCHPDTARDFLEIHLPSTLRQICNLNTLRLESGSFIEEDLRPHYSDILWSLETSEGDGYIYVV
IEHQSTPDAHMAFRLMRYAMAAMQRHLEAGHKTLPLVVPMLFYHGNRSPYPFSLCWLDEFADPVMARKLYATAFPLVDIT
VVPDDEIMRHRRVALLELIQKHIRQRDLMGLVEQLVALLVKGYANDTQLQSLFNYMMHTGDAARFNTFIRQVAMRIPQHK
EKIMTIAERLRQEGHRNGLQKGLQQGKQEGQRLAALRIARSMLNDGFDRDTVLRVTGLAPADLASESH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
YpsIP31758_3726 YP_001402680.1 transposase Not tested YAPI Protein 6e-92 61
pilW CAF28495.1 putative transposase Not tested YAPI Protein 2e-93 61
YE3497 YP_001007658.1 putative transposase Not tested YAPI Protein 6e-91 60
tnp AAN64216.1 transposase Not tested necrotizing factor locus Protein 2e-85 56
PMI2627 YP_002152329.1 transposase Not tested Not named Protein 1e-63 46