Gene Information

Name : rdgC
Accession : NP_454987.3
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : recombination associated protein RdgC
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 434430 - 435275 bp
Length : 846 bp
Strand : -
Note : Orthologue of E. coli yaiD (RDGC_ECOLI); Fasta hit to RDGC_ECOLI (303 aa), 93% identity in 281 aa overlap

DNA sequence :
ATGGAGAAACAGCTCGCCTCAATGACGTTTACCCCATGCGGTAGCCAGGATATGGCCAAAATGGGCTGGGTTCCGCCGAT
GGGCTCTCACAGCGATGCGTTAACGCACACCGCCAATGGCCAAATTATTATTTGCGCGCGCAAAGAAGAGAAAATCCTGC
CATCGCCAGTGATCAAACAGGCACTGGAGGCGAAAATCCAGAAACTGGAAGCCGATCAGGGACGCAAGCTGAAGAAGACG
GAAAAAGATTCCCTGAAGGATGAAGTGTTGCATTCGTTGCTGCCGCGCGCGTTTAGCCGCTTCAGTCAGACAATGATGTG
GATTGATACCGTTAACGGCCTGATTATGGTTGACTGCGCCAGCGCGAAAAAAGCGGAAGATACTTTGGCGCTACTGCGTA
AAAGTCTTGGCTCGCTGCCGGTCGTCCCGCTGGCGCTGGAAAATCCGATTGAGCTGACGCTCACCGAGTGGGTGCGCTCC
GGTACGGTCGCTCAGGGTTTCCAGTTGCTGGACGAAGCCGAATTGAAAGCGATGCTGGAAGATGGCGGCGTGATCCGCGC
GAAAAAGCAGGATCTGGTCAGCGACGAGATCGCCGTTCATATTGAAGCGGGTAAAGTGGTCACGAAGCTGGCGCTCGACT
GGCAGCAGCGTATTCAATTCGTCATGTGCGACGACGGCTCCATTAAGCGTCTGAAATTCTGCGATGAGCTGCGCGATCAG
AACGAAGATATCGACCGGGAAGATTTTGCCCAACGTTTTGATGCGGACTTTATCCTGATGACCGGCGAGCTGGCGGCGCT
GATTCAAAGCCTGGTGGAAGGATTAGGCGGCGAAGCGCAGCGCTAA

Protein sequence :
MEKQLASMTFTPCGSQDMAKMGWVPPMGSHSDALTHTANGQIIICARKEEKILPSPVIKQALEAKIQKLEADQGRKLKKT
EKDSLKDEVLHSLLPRAFSRFSQTMMWIDTVNGLIMVDCASAKKAEDTLALLRKSLGSLPVVPLALENPIELTLTEWVRS
GTVAQGFQLLDEAELKAMLEDGGVIRAKKQDLVSDEIAVHIEAGKVVTKLALDWQQRIQFVMCDDGSIKRLKFCDELRDQ
NEDIDREDFAQRFDADFILMTGELAALIQSLVEGLGGEAQR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ESA_00998 YP_001437103.1 hypothetical protein Not tested Not named Protein 1e-87 63