Gene Information

Name : STY4120
Accession : NP_458250.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : putative sugar-phosphate isomerase
Function : -
COG functional category : G : Carbohydrate transport and metabolism
COG ID : COG3623
EC number : 5.-.-.-
Position : 3984123 - 3984983 bp
Length : 861 bp
Strand : -
Note : Fasta hit to SGAU_ECOLI (284 aa), 59% identity in 279 aa overlap; Orthologue of E. coli yiaR (SGBU_ECOLI); Fasta hit to SGBU_ECOLI (286 aa), 91% identity in 286 aa overlap

DNA sequence :
ATGCGTAATCATCCATTAGGTATTTACGAGAAAGCACTGGCGAAAGATCTCAGTTGGCCAGAGCGGCTGGTGCTGGCAAA
AAGCTGCGGTTTTGATTTTGTTGAGATGTCGGTGGATGAAACCGACGAACGTCTCTCACGCCTGGAGTGGACCTCGGCCC
AACGCGCTTCGCTGGTGAACGCGATGCTGGAAAGCGGCGTCGCCATCCCGTCGATGTGCCTCTCCGCCCATCGTCGCTTC
CCTTTTGGCAGCCGCGACGAAGCGGTACGCCAGCGGGCGCGTGAAATCATGACCAAAGCCATTCGCCTGGCGCGCGACCT
GGGGATCCGCACCATCCAGTTGGCAGGTTACGACGTCTATTACGAAGAGCACGACGAAGGCACCCAGCAACGTTTCGCCG
AAGGGCTGGCGTGGGCGGTGGAACAGGCCGCAGCGGCGCAGGTGATGCTGGCGGTGGAGATCATGGATACCGCGTTTATG
AACTCCATCAGCAAGTGGAAAAAGTGGGACGAGATGCTTTCGTCACCGTGGTTCACCGTTTATCCAGACGTCGGCAACCT
CAGCGCCTGGGGGAACGACGTGACCGCCGAGCTGAAGCTGGGTATCGACCGTATCGCCGCGATCCACCTGAAAGACACGC
TGCCGGTGACCGGTGACAACCCCGGCCAGTTCCGCGACGTGCCGTTTGGCGAAGGATGCGTTGATTTTGTCAGCATCTTC
AAAACGCTGCATGAGCTGAACTATCGCGGTTCATTTCTGATTGAGATGTGGACAGAGAAAGCCAGCGAGCCGGTGCTGGA
AATTATCCAGGCCCGCCGCTGGATTGAATCACGGATGCAGGAAGGAGGTTTCACATGTTAG

Protein sequence :
MRNHPLGIYEKALAKDLSWPERLVLAKSCGFDFVEMSVDETDERLSRLEWTSAQRASLVNAMLESGVAIPSMCLSAHRRF
PFGSRDEAVRQRAREIMTKAIRLARDLGIRTIQLAGYDVYYEEHDEGTQQRFAEGLAWAVEQAAAAQVMLAVEIMDTAFM
NSISKWKKWDEMLSSPWFTVYPDVGNLSAWGNDVTAELKLGIDRIAAIHLKDTLPVTGDNPGQFRDVPFGEGCVDFVSIF
KTLHELNYRGSFLIEMWTEKASEPVLEIIQARRWIESRMQEGGFTC

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
M5005_Spy_0152 YP_281516.1 L-xylulose 5-phosphate 3-epimerase Not tested Not named Protein 1e-57 55