|
Name : STY4116 Accession : NP_458246.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : aldehyde dehydrogenase B Function : - COG functional category : C : Energy production and conversion COG ID : COG1012 EC number : 1.2.1.22 Position : 3978586 - 3980124 bp Length : 1539 bp Strand : + Note : Fasta hit to ALDA_ECOLI (478 aa), 33% identity in 478 aa overlap; Fasta hit to FEAB_ECOLI (499 aa), 34% identity in 481 aa overlap; Fasta hit to YNEI_ECOLI (462 aa), 31% identity in 465 aa overlap; Fasta hit to DHAB_ECOLI (489 aa), 38% identity in 478 aa DNA sequence : ATGACGAACAATCCCCCTTCAACACGTATTCAGCCAAGTGAATACGGGTACCCACTGAAGTTAAAAGCCCGCTATGACAA TTTTATTGGCGGTGACTGGGTTGCGCCCGCCGACGGCGAATATTATCAAAACCTGACGCCAGTGACCGGCCAGCCGCTAT GTGAAGTCGCTTCCTCCGGTAAAAAAGATATCGATTTAGCGCTCGACGCCGCGCATAAGGCGAAAGATAAGTGGGCGCAT ACGTCAGTACAAGACCGTGCCGCTATCTTGTTTAAGATCGCCGATCGGATGGAACAAAACCTCGAACTGTTGGCGACAGC GGAAACTTGGGATAACGGTAAACCGATTCGTGAAACCAGTGCCGCCGACATACCGCTGGCGATCGATCATTTCCGCTATT TCGCCTCCTGTATACGTGCGCAGGAGGGCGGGATCAGCGAAGTTGATAGCGAAACCGTGGCCTACCATTTTCACGAACCG CTTGGTGTCGTGGGGCAGATAATCCCGTGGAACTTTCCGCTGCTGATGGCAAGCTGGAAAATGGCGCCAGCGCTGGCGGC AGGTAACTGCGTGGTGCTTAAACCGGCACGCCTGACGCCGCTTTCCGTTTTACTGTTAATGGAAGTCATTGGCGATCTGT TACCGCCGGGCGTTGTCAACGTCGTGAACGGCGCGGGCGGCGAGATTGGCGAATATCTGGCGACCTCAAAACGTATCGCG AAGGTGGCGTTTACCGGTTCGACGGAAGTGGGTCAACAGATCATGCAGTACGCCACGCAGAACATTATTCCGGTGACGCT GGAGTTAGGCGGCAAGTCGCCCAATATCTTCTTCGCCGACGTGATGGATGAGGAAGATGCGTTCTTTGATAAAGCGCTGG AGGGATTTGCCCTGTTTGCCTTTAACCAGGGCGAGGTGTGTACCTGTCCAAGCCGTGCGCTGGTTCAGGAGTCCATCTAT GAGCGCTTTATGGAGCGCGCTATTCGCCGGGTGGAGAGCATTCGCAGCGGGAACCCGCTAGATAGCGGTACACAGATGGG AGCGCAGGTCTCTCACGGCCAGCTTGAGACTATCCTCAATTATATCGATATCGGTAAAAAAGAGGGGGCCGATATTCTGA CCGGTGGGCGACGCAAGGAACTGGATGGCGAACTTAAAGAGGGCTATTACCTTGAGCCTACCATTCTGTTTGGTAAGAAT AATATGCGCGTCTTTCAGGAGGAGATCTTTGGCCCGGTGCTGGCGGTAACCACCTTTAAAACCATGGAGAAGGCGCTGGA AATCGCTAACGATACGCAATATGGCCTGGGTGCTGGCGTCTGGAGCCGCAACGGCAATCTGGCCTATAAGATGGGGCGCG GCATTCAGGCCGGGCGCGTATGGACCAACTGCTATCACGCCTATCCGGCACATGCGGCGTTTGGCGGCTATAAGCAGTCG GGCATCGGGCGCGAAACCCATAAGATGATGCTGGAACACTACCAGCAAACCAAGTGCCTGTTGGTGAGTTATTCCGATAA GCCGCTGGGGCTGTTCTGA Protein sequence : MTNNPPSTRIQPSEYGYPLKLKARYDNFIGGDWVAPADGEYYQNLTPVTGQPLCEVASSGKKDIDLALDAAHKAKDKWAH TSVQDRAAILFKIADRMEQNLELLATAETWDNGKPIRETSAADIPLAIDHFRYFASCIRAQEGGISEVDSETVAYHFHEP LGVVGQIIPWNFPLLMASWKMAPALAAGNCVVLKPARLTPLSVLLLMEVIGDLLPPGVVNVVNGAGGEIGEYLATSKRIA KVAFTGSTEVGQQIMQYATQNIIPVTLELGGKSPNIFFADVMDEEDAFFDKALEGFALFAFNQGEVCTCPSRALVQESIY ERFMERAIRRVESIRSGNPLDSGTQMGAQVSHGQLETILNYIDIGKKEGADILTGGRRKELDGELKEGYYLEPTILFGKN NMRVFQEEIFGPVLAVTTFKTMEKALEIANDTQYGLGAGVWSRNGNLAYKMGRGIQAGRVWTNCYHAYPAHAAFGGYKQS GIGRETHKMMLEHYQQTKCLLVSYSDKPLGLF |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| VC0819 | NP_230467.2 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 7e-140 | 64 |
| aldA | AAC12273.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-145 | 63 |
| aldA | AAK20747.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-145 | 63 |
| aldA | AAK20776.1 | aldehyde dehydrogenase | Virulence | VPI | Protein | 2e-145 | 63 |
| aldA-1 | YP_001216300.1 | aldehyde dehydrogenase | Not tested | VPI-1 | Protein | 1e-144 | 63 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| STY4116 | NP_458246.1 | aldehyde dehydrogenase B | VFG0082 | Protein | 3e-140 | 64 |
