Gene Information

Name : radC
Accession : NP_458197.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : putative DNA repair protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG2003
EC number : -
Position : 3924952 - 3925617 bp
Length : 666 bp
Strand : +
Note : Similar to Escherichia coli DNA repair protein RadC radC SW:RADC_ECOLI (P25531) (222 aa) fasta scores: E(): 0, 83.7% id in 215 aa, and to Haemophilus influenzae DNA repair protein SW:RADC_HAEIN (P44952) (234 aa) fasta scores: E(): 0, 51.2% id in 217 aa

DNA sequence :
ATGGATACGTTGGACGAATTATTGCCGCGTGAAAAAATGCTCAGATCCGGCATTGCTTCCCTCAGCGACGTGGAACTGCT
GGCGCTTTTTTTACGTACCGGCACGCCGGGAAAAGATGTTATGACGTTGGCAAAAGAGATATTGCAGCACTTTGGGTCGC
TGTATGGCCTGCTGTCGGCGGACTTTGCGCAGTTTCGCGGCGTAAACGGCATCGGCCTGGCGAAATTCGCGCAGTTGAAA
GGCATTGCTGAGCTGGCAAGGCGCTATTACAGCGTGCGCATGAATGAGGAAAGTGCGTTGCTGAGTCCGGAAATGACGCG
GGAATTTCTGCAAAGCCAACTGACGGGCGAAGAGCGTGAGATCTTTCTGGTGATCTTCCTAGATGCCCAGCACCGGGTGC
TTCAGCACAGCCGCCTGTTTTCCGGCACGCTTAACCACGTAGAGGTGCATCCGCGTGAGATTGTTCGGGAAGCGATTAAA
CTCAATGCTTCAGCGGTCATTCTGGCGCATAATCACCCTTCAGGCTGCGCAGAGCCAAGTAAAGCAGATAAACTTATCAC
TGAGCGCGTGATAAAGTGTTGCCAGTTTATGGATATCCGGGTGCTCGATCACCTGATAATTGGGCGCGGAGAGTACGTTT
CTTTTGCCGAACGCGGCTGGATTTAA

Protein sequence :
MDTLDELLPREKMLRSGIASLSDVELLALFLRTGTPGKDVMTLAKEILQHFGSLYGLLSADFAQFRGVNGIGLAKFAQLK
GIAELARRYYSVRMNEESALLSPEMTREFLQSQLTGEEREIFLVIFLDAQHRVLQHSRLFSGTLNHVEVHPREIVREAIK
LNASAVILAHNHPSGCAEPSKADKLITERVIKCCQFMDIRVLDHLIIGRGEYVSFAERGWI

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
VPI2_0034 ACA01849.1 DNA repair protein RadC Not tested VPI-2 Protein 2e-25 44