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Name : STY4060 Accession : NP_458192.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : RNase PH Function : - COG functional category : J : Translation, ribosomal structure and biogenesis COG ID : COG0689 EC number : - Position : 3920902 - 3921618 bp Length : 717 bp Strand : + Note : Orthologue of E. coli rph (RNPH_ECOLI); Fasta hit to RNPH_ECOLI (238 aa), 95% identity in 238 aa overlap DNA sequence : ATGCGTCCAGCAGGCCGTAGCGCTAATCAGGTGCGTCCCGTAACCCTGACCCGTAACTATACAAAACACGCTGAAGGCTC GGTACTGGTCGAATTTGGAGATACCAAAGTGTTGTGCACTGCCTCCATTGAAGAAGGCGTTCCACGTTTTCTGAAAGGAC AAGGCCAGGGGTGGATCACCGCAGAGTATGGCATGTTACCTCGCGCTACCCATACCCGTAATGCGCGCGAAGCGGCAAAG GGTAAGCAGGGCGGTCGTACTATGGAAATTCAGCGTTTGATCGCGCGTGCGCTGCGTGCGGCGGTCGATCTGAAAACGCT CGGCGAATTTACCATTACGCTGGACTGCGATGTAATCCAGGCAGATGGCGGTACGCGTACAGCGTCTATTACCGGTGCCT GCGTGGCGTTGGCGGATGCGCTGAATAAATTGGTTGCCAACGGTAAGCTGAAAACCAATCCGATGAAAGGCATGGTGGCG GCGGTTTCCGTAGGCATCGTTAACGGCGAAGCGATCTGCGATCTGGAATATGTTGAAGATTCCGCCGCAGAAACCGACAT GAACGTCGTGATGACTGAAGACGGCCGCATTATTGAAGTTCAGGGTACCGCGGAAGGCGAGCCGTTCAGCCATGAAGAAC TTCTCACTTTGTTGGCGCTGGCCCGAGGGGGAATTGAATCCATTGTGGCGACGCAGAAGGCGGCGTTAGAAAATTGA Protein sequence : MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRATHTRNAREAAK GKQGGRTMEIQRLIARALRAAVDLKTLGEFTITLDCDVIQADGGTRTASITGACVALADALNKLVANGKLKTNPMKGMVA AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFSHEELLTLLALARGGIESIVATQKAALEN |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| rph | YP_001800860.1 | ribonuclease PH | Not tested | Not named | Protein | 1e-57 | 59 |
