Gene Information

Name : rmbA
Accession : NP_458174.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : conserved hypothetical protein
Function : -
COG functional category : K : Transcription
COG ID : COG2771
EC number : -
Position : 3894205 - 3894822 bp
Length : 618 bp
Strand : -
Note : Similar to several including: Salmonella typhimurium hypothetical protein RmbA TR:Q9Z626 (EMBL:AF106566) (205 aa) fasta scores: E(): 0, 99.0% id in 205 aa, Escherichia coli hypothetical protein YqeH SW:YQEH_ECOLI (Q46941) (210 aa) fasta scores: E(): 1.3e-

DNA sequence : 
ATGATGAGAAAGCCTTCACAAATTGTCCATTGCATTAGTTGCGATTTATCCTGTCAATTATTCCCTGACAGCGCAGTACG
GGTGCAATACTGTCATAATGCGGCATTTTCCATCTGGCCAGATGGTAATGCTTTCCTGAAAAAAGGGTTTATTGAAAAGT
TATTGCTTGATAGACACAACCATTTATCCAGCGGTTTTATCTTTGTTGATTTTTCTTTCCCGAATCTTCGACGATTTACC
GATTTACAATGGGCTGACAGTCTGGCAAACAGTGGTATGCATATTGTCCTGATTTCTGACAGAAGTTTAACTCCGCTGGC
CAATTACTGGATTTTGAAAAGCAATAAAATACAAGGAATTATTTATTCCGATGACGATGATATTGTGCAACAGCAAAAGA
TGCACCGCTTGTTTACCGGTCGGCTTGCCAACAGTAAACGTGGACGAACGCTTAACTATACGGAATTTATATTACTGAAG
CACTTTGTATCAGGAATAAGTATTCAGCAGATTGTAAATATTGACAATATTGATATTAAGAAACTTTATGTGCATAAGCT
GCGGCTTGAAAATAAGCTAGGGCATAGCATTCATAAAATAATATCAAATATTTTATAG

Protein sequence : 
MMRKPSQIVHCISCDLSCQLFPDSAVRVQYCHNAAFSIWPDGNAFLKKGFIEKLLLDRHNHLSSGFIFVDFSFPNLRRFT
DLQWADSLANSGMHIVLISDRSLTPLANYWILKSNKIQGIIYSDDDDIVQQQKMHRLFTGRLANSKRGRTLNYTEFILLK
HFVSGISIQQIVNIDNIDIKKLYVHKLRLENKLGHSIHKIISNIL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rmbA NP_458174.1 conserved hypothetical protein Not tested SPI-3 Protein 5e-87 100
unnamed AAO49826.1 RmbA Not tested SPI-3 Protein 9e-86 99
rmbA AAD16953.1 RmbA Not tested SPI-3 Protein 1e-86 99
rmbA YP_218664.1 hypothetical protein Not tested SPI-3 Protein 4e-86 99
rmbA NP_462655.1 hypothetical protein Not tested SPI-3 Protein 2e-86 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
rmbA NP_458174.1 conserved hypothetical protein VFG0567 Protein 5e-87 99