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Name : STY3990 Accession : NP_458145.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : probable permease Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0738 EC number : - Position : 3855157 - 3856473 bp Length : 1317 bp Strand : + Note : Similar to Escherichia coli L-fucose permease SW:FUCP_ECOLI () (438 aa) fasta scores: E(): 0, 34.5% id in 423 aa; Paralogue of E. coli fucP (FUCP_ECOLI); Fasta hit to FUCP_ECOLI (438 aa), 35% identity in 423 aa overlap DNA sequence : ATGAACGATAAAAACATCGTTCAGATGCCCGACGGGTATCTGAATAAGACACCTCTGTTCCAGTTTATTTTGTTATCCTG TTTATTCCCGTTATGGGGATGCGCAGCCGCGTTAAATGATATTCTGATTACGCAATTTAAAAGTGTATTTTCGCTGAGCA ACTTTGCTTCGGCATTAGTACAAAGCGCCTTTTATGGCGGTTATTTTTTAATTGCTATTCCGGCCTCGCTGGTCATTAAA AAAACCAGTTATAAAGTGGCGATACTTATCGGCCTGACGCTATACATTGTCGGCTGTACGCTCTTTTTTCCGGCGTCGCA CATGGCGACCTACACCATGTTCCTCGCGGCGATTTTCGCCATTGCGATTGGCCTGAGTTTCCTGGAAACGGCGGCGAATA CCTACAGTTCGATGATCGGGCCGAAAGCCTACGCCACGCTGCGGCTGAATATCAGCCAGACCTTTTATCCGATCGGCGCG GCGGCAGGCATTTTATTGGGTAAGTATCTGGTCTTTTCCGAAGGGGAAAGCCTGGAAAAACAGATGGCGGGCATGAATGC CGAGCAAGTCCACAACTTCAAGGTGTTGATGCTGGAAAACACTCTGGAACCCTATAAGTACATGATTATGGTTCTGGTAG TGGTGATGGTACTGTTCCTGCTGACGCGTTTTCCGACCTGTAAAGTTGCGCAAACCGCGAGTCATAAACGTCCCTCGGCG CTGGATACGCTACGCTATCTCGCCAGTAACGCCCGCTTCCGTCGCGGTATTGTGGCGCAGTTCCTGTATGTGGGAATGCA GGTGGCGGTCTGGTCGTTCACTATTCGTCTGGCGCTGGAGTTAGGCGATATCAATGAGCGCGATGCCTCAACCTTTATGG TCTACAGCTTCGCCTGCTTTTTTATCGGCAAGTTTATCGCCAACATTCTGATGACGCGCTTCAACCCGGAAAAAGTCCTG ATCCTTTACTCTGTGATCGGCGCGCTGTTCCTGGCCTATGTGGCGCTGGCGCCCAGCTTTAGCGCGGTATACGTGGCGGT GCTGGTCAGTGTTCTGTTTGGCCCCTGCTGGGCGACCATTTATGCCGGAACGCTCGATACCGTCGATAACGAGCATACCG AAATGGCGGGGGCGGTCATCGTGATGGCGATTGTCGGCGCGGCGGTGGTTCCCGCGATTCAGGGCTACGTGGCGGACATG TTCCACTCGTTACAGCTCTCATTCCTGGTTTCCATGCTGTGCTTTGTTTACGTTGGCGTTTACTTCTGGCGCGAAAGCAA AGTGCGCGGCAACCTGGCTGAAGTCGCCGCGTCCTGA Protein sequence : MNDKNIVQMPDGYLNKTPLFQFILLSCLFPLWGCAAALNDILITQFKSVFSLSNFASALVQSAFYGGYFLIAIPASLVIK KTSYKVAILIGLTLYIVGCTLFFPASHMATYTMFLAAIFAIAIGLSFLETAANTYSSMIGPKAYATLRLNISQTFYPIGA AAGILLGKYLVFSEGESLEKQMAGMNAEQVHNFKVLMLENTLEPYKYMIMVLVVVMVLFLLTRFPTCKVAQTASHKRPSA LDTLRYLASNARFRRGIVAQFLYVGMQVAVWSFTIRLALELGDINERDASTFMVYSFACFFIGKFIANILMTRFNPEKVL ILYSVIGALFLAYVALAPSFSAVYVAVLVSVLFGPCWATIYAGTLDTVDNEHTEMAGAVIVMAIVGAAVVPAIQGYVADM FHSLQLSFLVSMLCFVYVGVYFWRESKVRGNLAEVAAS |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoP | ADD91723.1 | permease DeoP | Not tested | PAI-I AL862 | Protein | 2e-168 | 97 |
| unnamed | CAE85172.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 1e-167 | 96 |
