|
Name : STY3989 Accession : NP_458144.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : putative carbohydrate kinase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0524 EC number : - Position : 3854206 - 3855126 bp Length : 921 bp Strand : + Note : Similar to several carbohydrate kinases e.g. Lactobacillus sake ribokinase RbsK TR:Q9X4M5 (EMBL:AF115391) (302 aa) fasta scores: E(): 0, 37.0% id in 292 aa and Schizosaccharomyces pombe putative ribokinase SW:RBSK_SCHPO (O60116) (318 aa) fasta scores: E() DNA sequence : ATGGATATCGCGGTTATTGGCTCTAACATGGTGGACCTTATCACCTACACCAACCAGATGCCCAAAGAAGGGGAAACTCT GGAAGCGCCGGCGTTTAAAATCGGCTGCGGCGGAAAAGGGGCGAACCAGGCCGTGGCGGCCGCTAAGCTCAATTCAAAAG TATTGATGTTGACCAAAGTGGGCGACGATATTTTTGCCGACAACACCATTCGTAATCTCGAATCCTGGGGGATCAATACG ACGTATGTAGAAAAAGTACCGTGTACCAGCAGCGGCGTAGCGCCGATTTTCGTCAACGCCAACTCCAGCAACAGCATTCT GATCATCAAAGGCGCTAACAAGTTTCTCTCGCCGGAAGATATCGATCGCGCGGCGGAAGATTTAAAAAAATGCCAGCTTA TTGTTCTGCAACTGGAAGTTCAGCTTGAAACGGTTTATCACGCAATAGAATTTGGCAAGAAACACGGGATTGAAGTGTTA TTAAACCCTGCGCCAGCATTACGGGAATTAGATATGTCTTATGCCTGTAAATGCGATTTCTTTGTACCTAATGAAACCGA GCTGGAAATATTAACCGGTATGCCAGTGGATACCTATGACCATATTCGCGCAGCGGCACGTTCGCTGGTAGATAAAGGGC TGAACAATATTATTGTCACCATGGGCGAGAAAGGCGCGCTGTGGATGACGCGTGACCAGGAAGTCCATGTTCCGGCGTTT AGAGTGAACGCTGTTGATACCAGCGGCGCGGGCGATGCCTTTATCGGCTGTTTCGCGCATTACTACGTCCAGAGCGGGGA TGTGGAAGCCGCCATGAAAAAAGCCGTCCTCTTTGCCGCTTTCAGCGTCACCGGGAAAGGCACCCAATCCTCTTATCCAA GCATTGAGCAATTTAATGAGTATCTTTCGTTGAACGAATAA Protein sequence : MDIAVIGSNMVDLITYTNQMPKEGETLEAPAFKIGCGGKGANQAVAAAKLNSKVLMLTKVGDDIFADNTIRNLESWGINT TYVEKVPCTSSGVAPIFVNANSSNSILIIKGANKFLSPEDIDRAAEDLKKCQLIVLQLEVQLETVYHAIEFGKKHGIEVL LNPAPALRELDMSYACKCDFFVPNETELEILTGMPVDTYDHIRAAARSLVDKGLNNIIVTMGEKGALWMTRDQEVHVPAF RVNAVDTSGAGDAFIGCFAHYYVQSGDVEAAMKKAVLFAAFSVTGKGTQSSYPSIEQFNEYLSLNE |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| deoK | ADD91722.1 | deoxyribokinase DeoK | Not tested | PAI-I AL862 | Protein | 2e-124 | 97 |
| unnamed | CAE85173.1 | hypothetical protein | Not tested | PAI V 536 | Protein | 3e-124 | 97 |
| ORF4 | AAK27331.1 | unknown | Not tested | PAI-I AL862 | Protein | 5e-115 | 93 |
