Gene Information

Name : STY3621
Accession : NP_457813.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : porphobilinogen deaminase
Function : -
COG functional category : H : Coenzyme transport and metabolism
COG ID : COG0181
EC number : -
Position : 3474982 - 3475923 bp
Length : 942 bp
Strand : +
Note : Orthologue of E. coli hemC (HEM3_ECOLI); Fasta hit to HEM3_ECOLI (313 aa), 89% identity in 313 aa overlap

DNA sequence :
ATGTTAGACAATGTTTTAAGAATTGCCACACGCCAAAGTCCCCTTGCGCTTTGGCAGGCACATTATGTCAAAGACGCATT
GATGGCAACCCATCCGGGACTGACGGTAGAACTGGTGCCGATGGTCACACGCGGCGACGTGATTCTCGATACTCCCCTGG
CGAAAGTGGGCGGTAAGGGACTGTTTGTTAAAGAGCTTGAAATCGCGCTGCTGGAAAAACGCGCTGATATCGCCGTGCAC
TCTATGAAAGACGTTCCGGTGGCCTTCCCGGACGGTCTCGGTCTGGTGACCATTTGCGAGCGCGAAGATCCGCGCGACGC
GTTTGTCTCGAATAAATATCACAGTCTGGACGATCTGCCCGCGGGTAGTATCGTCGGGACGTCCAGTTTGCGTCGTCAGT
GTCAACTGGCGGAACGCCGTCCGGATCTCATTATCCGTTCGTTGCGCGGCAACGTCGGCACACGTCTCGGCAAGCTGGAT
AACGGCGACTATGACGCCATTATCCTGGCCGTGGCCGGTCTGAAACGCTTAGGTCTGGAGTCGCGCATTCGCACAGCCTT
GCCGCCTGACGTTTCGCTTCCTGCCGTAGGCCAGGGCGCTGTCGGGATTGAGTGTCGTCTTGACGACGCGCGAACACAGG
CGCTGCTCGCACCGTTGAATCACTCGCAAACCGCGCTGCGCGTAACGGCGGAACGTGCTATGAACACCCGCCTGGAAGGC
GGTTGTCAGGTGCCGATTGGCAGCTATGCAGAAATCATCAACGGTGAAATTTGGCTACGCGCGCTGGTTGGCGCGCCGGA
CGGTTCGGTGATGGTGCGCGGCGAACGTCGTGGTTCTCCCGAGCAGGCGGAGCAAATGGGCATCTCGCTTGCAGAGGAAC
TGCTGGAAAACGGCGCGCGCGCGATTCTGACGGAAGTTTATAACGGCGAGACGCCCGCATGA

Protein sequence :
MLDNVLRIATRQSPLALWQAHYVKDALMATHPGLTVELVPMVTRGDVILDTPLAKVGGKGLFVKELEIALLEKRADIAVH
SMKDVPVAFPDGLGLVTICEREDPRDAFVSNKYHSLDDLPAGSIVGTSSLRRQCQLAERRPDLIIRSLRGNVGTRLGKLD
NGDYDAIILAVAGLKRLGLESRIRTALPPDVSLPAVGQGAVGIECRLDDARTQALLAPLNHSQTALRVTAERAMNTRLEG
GCQVPIGSYAEIINGEIWLRALVGAPDGSVMVRGERRGSPEQAEQMGISLAEELLENGARAILTEVYNGETPA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
BJAB07104_00327 YP_008207792.1 Porphobilinogen deaminase Not tested AbaR25 Protein 5e-86 61
BJAB0868_00331 YP_008211657.1 Porphobilinogen deaminase Not tested AbaR26 Protein 5e-86 61