Gene Information

Name : STY3494
Accession : NP_457694.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : conserved hypothetical protein
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 3335488 - 3336474 bp
Length : 987 bp
Strand : +
Note : Fasta hit to GUTQ_ECOLI (308 aa), 46% identity in 308 aa overlap; Orthologue of E. coli yrbH (YRBH_ECOLI); Fasta hit to YRBH_ECOLI (328 aa), 92% identity in 328 aa overlap

DNA sequence :
ATGTCGCATTTAGCGTTGCAACCGGGGTTTGACTTTCAGCAGGCAGGCAAAGAGGTCCTGGAAATTGAACGTGAAGGCCT
GGCGGAGCTTGATCAATATATCAACCAGCATTTCACGCTGGCCTGTGAAAAAATGTTCAACTGCACCGGAAAAGTGGTGG
TCATGGGGATGGGGAAATCCGGCCATATCGGACGGAAAATGGCCGCCACGTTCGCCAGTACCGGCACCTCTTCCTTTTTT
GTACATCCAGGCGAAGCCGCGCACGGCGATTTGGGGATGGTTACGCCGCAGGATGTGGTTATCGCTATCTCCAACTCCGG
CGAATCCAGCGAGATCGCGGCGCTAATACCGGTGCTTAAACGGCTGCACGTACCGTTAATTTGCATTACCGGGCGACCGG
AAAGCAGCATGGCGCGTGCGGCAGATGTGCATCTATGTGTTAAAGTGCCCAAAGAAGCGTGTCCGTTAGGCCTGGCGCCT
ACCAGTAGTACCACCGCAACGCTGGTGATGGGCGACGCGCTCGCCGTGGCGTTGTTAAAAGCGCGCGGCTTTACCGCCGA
GGATTTCGCTCTGTCGCATCCTGGCGGCGCGCTGGGACGTAAGCTACTGCTGCGCGTAAGCGATATTATGCATACTGGCG
ATGAGATCCCGCATGTTAATAAACATGCCACCCTGCGTGATGCGCTGTTAGAAATTACGCGTAAAAATCTCGGTATGACC
GTCATTTGCGATGAATCCATGAAGATCGACGGTATCTTCACCGACGGCGATTTACGTCGCATGTTCGATATGGGCGGCGA
TATGCGCCAGTTGGGGATCGCCGAGGTGATGACGCCAGGGGGCATTCGCGTGCGTCCCGGTATTCTCGCTGTCGATGCGC
TGAATTTAATGCAGTCCCGCCATATCACCTCCGTACTGGTTGCTGATGGCGACCAGTTACTCGGTGTGTTACATATGCAT
GATCTCCTGCGTGCAGGCGTCGTGTAG

Protein sequence :
MSHLALQPGFDFQQAGKEVLEIEREGLAELDQYINQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSSFF
VHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAP
TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMT
VICDESMKIDGIFTDGDLRRMFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQLLGVLHMH
DLLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 9e-47 41
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-47 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 5e-47 41