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Name : steC Accession : NP_457345.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : periplasmic fimbrial chaperone Function : - COG functional category : N : Cell motility COG ID : COG3121 EC number : - Position : 2952350 - 2953123 bp Length : 774 bp Strand : + Note : Similar to Salmonella typhimurium periplasmic fimbrial chaperone StfD TR:O87659 (EMBL:AF093503) (250 aa) fasta scores: E(): 0, 52.4% id in 250 aa and to Escherichia coli hypothetical fimbrial chaperone SW:YFCS_ECOLI (250 aa) fasta scores: E(): 0, 52.1% id DNA sequence : ATGAACAAGACCAACCATTTTAATCGCCAGGCGCTTATTGCCACGGTATTACTGGCTGCGCCGCTGGTGTCACACAGCGC GATTGTGCCGGATCGTACCCGCGTTATTTTTAACGGCAATGAAAATTCAATCACCGTCACGCTGAAAAACGGCAACGCCA CTCTGCCCTATCTCGCTCAGGCGTGGCTGGAAGACGATAAGTTCGCCAAAGATACCCGCTATTTTACCGCCCTGCCGCCG CTGCAGCGTATTGAGCCAAAATCCGACGGGCAGGTTAAAGTCCAGCCGTTACCAGCCGCGGCTGGCCTACCGCAGGACCG GGAAAGTCTGTTTTATTTCAACGTGCGAGAAATTCCGCCGAAAAGCGATAAGCCTAATACGCTCCAGCTGGCGCTGCAAA CGCGTATTAAGTTTTTCTACCGCCCGGTAGCCGTAGCCCGGCAGGTGGATAAGACGCACCCGTGGCAGACGAAGCTCACG CTGACCTACCAGGGCGATGGTGTGATCTTCGACAACCCCACACCGTTTTACCTCGTCATCAGCAATGCCGGTAGCAAAGA GAACGAGACCGCCTCCGGCTTTAAAAACCTGCTGATTGCCCCGCGTGAAAAAGTGACCTCTCCCATCAAAGGTGCCTCGC TCGGCAGCTCACCGGTGGTGGGCTACGTCGATGATTACGGCGGCCATCGCCTGCTGGTTTTTACCTGCTCAGGGAATACC TGCAAGGTCAATGAGGAAAAAACCCGTGACGCTGAGAAGAAAGCGAATAAGTAA Protein sequence : MNKTNHFNRQALIATVLLAAPLVSHSAIVPDRTRVIFNGNENSITVTLKNGNATLPYLAQAWLEDDKFAKDTRYFTALPP LQRIEPKSDGQVKVQPLPAAAGLPQDRESLFYFNVREIPPKSDKPNTLQLALQTRIKFFYRPVAVARQVDKTHPWQTKLT LTYQGDGVIFDNPTPFYLVISNAGSKENETASGFKNLLIAPREKVTSPIKGASLGSSPVVGYVDDYGGHRLLVFTCSGNT CKVNEEKTRDAEKKANK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pixD | CAE85158.1 | PixD protein | Not tested | PAI V 536 | Protein | 2e-46 | 44 |
| papD | NP_755464.1 | PapD protein | Virulence | PAI I CFT073 | Protein | 2e-39 | 43 |
| papD | AAZ04423.1 | P pilus chaperone | Virulence | PAI I APEC-O1 | Protein | 5e-46 | 42 |
| papD | YP_854253.1 | pilus assembly protein chaperone PapD | Virulence | PAI I APEC-O1 | Protein | 7e-46 | 42 |
| prfD | CAD42028.1 | PrfD protein | Virulence | PAI II 536 | Protein | 1e-45 | 42 |
| papD_2 | NP_757033.1 | PapD protein | Virulence | PAI II CFT073 | Protein | 1e-45 | 41 |
| papD | YP_002414014.1 | Chaperone protein PapD | Not tested | Not named | Protein | 1e-45 | 41 |
| papD | AAL67413.1 | PapD | Virulence | PAI II CFT073 | Protein | 8e-46 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| steC | NP_457345.1 | periplasmic fimbrial chaperone | VFG0885 | Protein | 8e-40 | 43 |
| steC | NP_457345.1 | periplasmic fimbrial chaperone | VFG1547 | Protein | 6e-46 | 42 |
| steC | NP_457345.1 | periplasmic fimbrial chaperone | VFG0896 | Protein | 4e-46 | 41 |
