Gene Information

Name : spaO
Accession : NP_457285.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : surface presentation of antigens protein (associated with type III secretion and virulence)
Function : -
COG functional category : N : Cell motility
COG ID : COG1886
EC number : -
Position : 2886335 - 2887246 bp
Length : 912 bp
Strand : -
Note : Previously sequenced Salmonella typhi surface presentation of antigens protein SpaO SW:SPAO_SALTI (Q56022) (303 aa) fasta scores: E(): 0, 100.0% id in 303 aa

DNA sequence :
ATGTCATTGCGTGTGAGACAGATTGATCGTCGCGAATGGCTATTGGCGCAAACCGCGACAGAATGCCAGCGCCATGGCCG
GGAAGCGACGCTGGAATATCCGACGCGACAGGGAATGTGGGTTCGGTTGAGCGATGCAGAAAAACGGTGGTCGGCCTGGA
TTAAACCTGGGGGCTGGCTTGAGCATGTCTCTCCCGCTCTGGCGGGGGCGGCGGTTTCTGCCGGTGCTGAGCACCTGGTC
GTTCCCTGGCTTGCTGCAACAGAGCGACCGTTTGAGTTGCCCGTGCCGCATTTGTCCTGTCGGCGTTTATGCGTAGAGAA
CCCCGTACCGGGAAGCGCGCTGCCGGAAGGGAAATTGTTGCACATTATGAGCGATCGGGGCGGCCTGTGGTTTGAGCATC
TTCCTGAACTGCCTGCAGTCGGGGGCGGCAGGCCGAAAATGCTGCGTTGGCCGTTGCGCTTTGTAATCGGTAGCAGTGAT
ACGCAGCGTTCTTTGCTGGGCCGAATCGGGATCGGAGATGTACTCCTGATTCGTACTTCCCGTGCGGAAGTTTATTGCTA
CGCGAAAAAGTTAGGTCATTTCAACCGTGTTGAAGGGGGAATTATTGTGGAAACGTTAGATATTCAACATATCGAAGAAG
AAAATAATACAACTGAAACTGCAGAAACTCTGCCTGGCTTGAATCAATTGCCCGTCAAACTGGAATTTGTTTTGTATCGT
AAGAACGTTACCCTCGCCGAACTCGAAGCCATGGGGCAGCAACAGCTATTATCACTGCCGACCAATGTTGAACTTAACGT
TGAAATTATGGCGAATGGTGTTTTGCTTGGTAATGGCGAACTGGTACAGATGAATGACACCTTAGGCGTTGAGATCCATG
AATGGCTGAGCGAGTCTGGTAATGGGGAATGA

Protein sequence :
MSLRVRQIDRREWLLAQTATECQRHGREATLEYPTRQGMWVRLSDAEKRWSAWIKPGGWLEHVSPALAGAAVSAGAEHLV
VPWLAATERPFELPVPHLSCRRLCVENPVPGSALPEGKLLHIMSDRGGLWFEHLPELPAVGGGRPKMLRWPLRFVIGSSD
TQRSLLGRIGIGDVLLIRTSRAEVYCYAKKLGHFNRVEGGIIVETLDIQHIEEENNTTETAETLPGLNQLPVKLEFVLYR
KNVTLAELEAMGQQQLLSLPTNVELNVEIMANGVLLGNGELVQMNDTLGVEIHEWLSESGNGE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
spaO NP_457285.1 surface presentation of antigens protein (associated with type III secretion and virulence) Virulence SPI-1 Protein 4e-128 100
spaO NP_806494.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 4e-128 100
spaO YP_217810.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 2e-125 99
spaO NP_461812.1 surface presentation of antigens protein SpaO Virulence SPI-1 Protein 2e-127 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
spaO NP_457285.1 surface presentation of antigens protein (associated with type III secretion and virulence) VFG0552 Protein 9e-128 99