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Name : spaS Accession : NP_457281.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : secretory protein (associated with virulence) Function : - COG functional category : N : Cell motility COG ID : COG1377 EC number : - Position : 2883533 - 2884603 bp Length : 1071 bp Strand : - Note : Similar to Salmonella typhimurium surface presentation of antigens protein SpaS SW:SPAS_SALTY (P40702) (356 aa) fasta scores: E(): 0, 99.4% id in 356 aa. Contains possible membrane spanning hydrophobic domains. DNA sequence : ATGTCCTCGAATAAAACAGAAAAACCGACTAAAAAACGGCTGGAAGACTCCGCTAAAAAAGGCCAGTCATTTAAAAGTAA AGATCTCATTATCGCCTGTCTGACGCTGGGAGGAATTGCCTATCTGGTGTCGTATGGCTCATTTAATGAGTTTATGGGGA TAATTAAGATCATTATTGCGGATAATTTTGATCAGAGCATGGCTGATTACAGTTTGGCCGTTTTTGGGATAGGATTAAAA TATCTGATTCCATTTATGCTGCTCTGTTTAGTGTGTTCCGCATTACCGGCGTTATTACAGGCCGGTTTCGTGCTGGCGAC AGAAGCATTAAAACCTAATTTATCGGCGTTAAACCCGGTAGAAGGGGCGAAAAAACTTTTTAGTATGCGCACGGTTAAAG ATACGGTCAAAACCCTACTGTATCTCTCATCCTTTGTGGTGGCCGCCATCATTTGCTGGAAGAAATATAAGGTTGAAATC TTTTCTCAGTTAAATGGCAATGTTGTGGATATTGCCGTCATTTGGCGTGAACTTCTCCTCGCATTGGTATTAACTTGCCT TGCTTGCGCATTGATTGTCTTATTATTGGATGCTATTGCGGAATATTTCCTGACCATGAAAGATATGAAAATGGATAAGG AAGAAGTGAAGCGTGAAATGAAGGAGCAGGAAGGGAACCCAGAGGTTAAATCTAAAAGACGTGAAGTTCATATGGAAATT CTGTCTGAACAGGTGAAATCCGATATTGAAAACTCACGCCTGATTGTTGCCAACCCCACGCATATTACGATCGGGATTTA TTTTAAACCCGAATTGATGCCGATTCCGATGATCTCGGTGTATGAAACGAATCAGCGCGCACTGGCCGTCCGCGCCTATG CGGAGAAGGTTGGCGTACCTGTGATCGTCGATATCAAACTGGCGCGCAGTCTTTTCAAAACCCATCGCCGTTATGATCTG GTGAGTCTGGAAGAAATTGATGAAGTTTTACGTCTTCTGGTTTGGCTGGAAGAGGTAGAAAACGCGGGCAAAGACGTTAT TCAGCCACAAGAAAACGAGGTACGGCATTGA Protein sequence : MSSNKTEKPTKKRLEDSAKKGQSFKSKDLIIACLTLGGIAYLVSYGSFNEFMGIIKIIIADNFDQSMADYSLAVFGIGLK YLIPFMLLCLVCSALPALLQAGFVLATEALKPNLSALNPVEGAKKLFSMRTVKDTVKTLLYLSSFVVAAIICWKKYKVEI FSQLNGNVVDIAVIWRELLLALVLTCLACALIVLLLDAIAEYFLTMKDMKMDKEEVKREMKEQEGNPEVKSKRREVHMEI LSEQVKSDIENSRLIVANPTHITIGIYFKPELMPIPMISVYETNQRALAVRAYAEKVGVPVIVDIKLARSLFKTHRRYDL VSLEEIDEVLRLLVWLEEVENAGKDVIQPQENEVRH |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | Virulence | SPI-1 | Protein | 2e-133 | 100 |
| spaS | NP_806490.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-133 | 100 |
| spaS | YP_217806.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 2e-132 | 99 |
| spaS | NP_461808.1 | surface presentation of antigens protein SpaS | Virulence | SPI-1 | Protein | 6e-133 | 99 |
| spaS | AAS66868.1 | SpaS | Not tested | SSR-2 | Protein | 2e-67 | 55 |
| ECs3721 | NP_311748.1 | surface presentation of antigens protein SpaS | Not tested | LIM | Protein | 5e-59 | 54 |
| ysaU | AAS66849.1 | YsaU | Not tested | SSR-1 | Protein | 2e-43 | 45 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | VFG0548 | Protein | 2e-133 | 99 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | VFG1015 | Protein | 2e-51 | 49 |
| spaS | NP_457281.1 | secretory protein (associated with virulence) | VFG2452 | Protein | 3e-48 | 45 |
