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Name : sipC Accession : NP_457278.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : pathogenicity island 1 effector protein Function : - COG functional category : - COG ID : - EC number : - Position : 2879857 - 2881086 bp Length : 1230 bp Strand : - Note : Similar to Salmonella typhi SipC TR:Q56135 (EMBL:X82670) (409 aa) fasta scores: E(): 0, 100.0% id in 409 aa and to Shigella flexneri 42 kDa membrane antigen precursor ipaC SW:IPAC_SHIFL (P18012) (382 aa) fasta scores: E(): 5.7e-11, 31.4% id in 398 aa DNA sequence : ATGTTAATTAGTAATGTGGGAATAAATCCCGCCGCTTATTTAAATAATCATTCTGTTGAGAATAGTTCACAGACAGCTTC GCAATCCGTTAGCGCTAAAGATATTCTGAATAGTATTGGTATTAGCAGCAGTAAAGTCAGTGACCTGGGGTTGAGTCCTA CACTGAGCGCGCCTGCGCCAGGGGTATTAACGCAAACCCCCGGAACGATCACGTCCTTTTTAAAAGCCAGTATTCAAAAT ACCGACATGAATCAGGATTTGAATGCCCTGGCAAATAATGTCACGACTAAAGCGAATGAGGTTGTGCAAACCCAGTTACG CGAGCAGCAGGCAGAAGTCGGAAAGTTTTTTGATATTAGCGGAATGTCTTCCAGTGCCGTTGCGCTGTTGGCTGCCGCGA ATACGTTAATGCTGACGTTGAACCAGGCTGATAGCAAACTGTCTGGTAAGTTGTCATTAGTCAGTTTTGATGCAGCTAAA ACGACGGCAAGCTCCATGATGCGCGAAGGGATGAATGCGTTGTCCGGTAGTATTTCCCAGAGCGCGCTTCAGTTGGGGAT CACTGGCGTGGGCGCCAAACTGGAATATAAGGGGCTGCAGAATGAAAGAGGCGCGCTTAAACATAATGCCGCGAAGATCG ATAAACTGACCACTGAAAGCCACAGTATTAAAAACGTGCTGAACGGGCAGAATAGCGTCAAACTTGGTGCTGAAGGCGTC GATTCTCTGAAATCGTTAAATATGAAGAAAACCGGTACCGATGCGACGAAAAATCTTAATGATGCGACGCTTAAATCTAA TGCCGGAACCAGCGCCACGGAAAGTCTGGGTATTAAAAACAGTAATAAACAAATCTCCCCTGAACATCAGGCTATTCTGT CGAAACGTCTTGAGTCTGTCGAATCCGATATTCGTCTTGAGCAGAATACCATGGATATGACCCGAATCGATGCGCGCAAG ATGCAGATGACGGGCGATCTGATTATGAAGAACTCAGTCACGGTCGGTGGTATTGCAGGGGCGTCCAGGCAGTACGCCGC TACTCAGGAACGTTCCGAGCAGCAAATTAGCCAGGTGAATAACCGGGTTGCCAGCACCGCATCGGACGAAGCCCGTGAAA GTTCACGTAAATCGACCAGCCTGATTCAGGAAATGCTGAAAACAATGGAGAGCATTAACCAGTCGAAAGCATCCGCACTC GCTGCTATCGCAGGCAATATTCGCGCTTAA Protein sequence : MLISNVGINPAAYLNNHSVENSSQTASQSVSAKDILNSIGISSSKVSDLGLSPTLSAPAPGVLTQTPGTITSFLKASIQN TDMNQDLNALANNVTTKANEVVQTQLREQQAEVGKFFDISGMSSSAVALLAAANTLMLTLNQADSKLSGKLSLVSFDAAK TTASSMMREGMNALSGSISQSALQLGITGVGAKLEYKGLQNERGALKHNAAKIDKLTTESHSIKNVLNGQNSVKLGAEGV DSLKSLNMKKTGTDATKNLNDATLKSNAGTSATESLGIKNSNKQISPEHQAILSKRLESVESDIRLEQNTMDMTRIDARK MQMTGDLIMKNSVTVGGIAGASRQYAATQERSEQQISQVNNRVASTASDEARESSRKSTSLIQEMLKTMESINQSKASAL AAIAGNIRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sipC | NP_457278.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-174 | 100 |
| sipC | NP_806487.1 | pathogenicity island 1 effector protein | Virulence | SPI-1 | Protein | 5e-174 | 100 |
| sipC | YP_217803.1 | cell invasion protein | Virulence | SPI-1 | Protein | 1e-172 | 99 |
| sipC | NP_461805.1 | translocation machinery component | Virulence | SPI-1 | Protein | 1e-172 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sipC | NP_457278.1 | pathogenicity island 1 effector protein | VFG0545 | Protein | 5e-173 | 99 |
