Gene Information

Name : sipF
Accession : NP_457275.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : probable acyl carrier protein
Function : -
COG functional category : I : Lipid transport and metabolism
COG ID : COG0236
EC number : -
Position : 2876422 - 2876670 bp
Length : 249 bp
Strand : -
Note : Previously sequenced Salmonella typhi SipF TR:P74850 (EMBL:X92546) (82 aa) fasta scores: E(): 1.2e-32, 98.8% id in 82 aa. Also highly similar to Synechocystis sp acyl carrier protein AcpP SW:ACP_SYNY3 (P20804; P73284) (77 aa) fasta scores: E(): 7.7e-06, 3

DNA sequence :
ATGAATATGGATATTGAAGCAAGAGTCAAAAAAGTGATCACCTCCTGTATTGCCGTTGATGTTGATAGTATCAATGGTCA
GACCCATCTGGTTGAGGATCTTTACGCTGACTCATTGGATTTAATTGATATTGTATTTGGTCTTAGTGAGGAGTTTGACA
TTAGTTGTAATGAAAACGATCTTCCTGATATGACGACCTTTGCGGATATATGCCGTGTTGTTAAAAAAAGTCTTGAGTCC
AGGGTGTAG

Protein sequence :
MNMDIEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKKSLES
RV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sipF NP_806484.1 acyl carrier protein Virulence SPI-1 Protein 8e-32 100
sipF NP_457275.1 probable acyl carrier protein Not tested SPI-1 Protein 8e-32 100
iacP NP_461802.1 acyl carrier protein Virulence SPI-1 Protein 3e-31 99
iacp YP_217800.1 acyl carrier protein Not tested SPI-1 Protein 9e-32 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sipF NP_457275.1 probable acyl carrier protein VFG0542 Protein 8e-32 99