Gene Information

Name : STY2996
Accession : NP_457269.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : AraC-family transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG2207
EC number : -
Position : 2869850 - 2870779 bp
Length : 930 bp
Strand : +
Note : Similar to several from Salmonella typhimurium including: TR:Q9X5C3 (EMBL:AF124398) HilD transcriptional regulator (309 aa) fasta scores: E(): 0, 99.4% id in 309 aa and SW:YGBG_SALTY (P41782) hypothetical 17.2 kDa protein found upstream of prgH fasta scor

DNA sequence : 
ATGGAAAATGTAACCTTTGTAAGTAATAGTCATCAGCGTCCTGCCGCAGATAACTTACAGAAATTAAAATCACTTTTGAC
AAATACCCAGCAGCAAATTAAAAGTCAGACTCAGCAGGTTACCATCAAAAATCTTTATGTAAGCAGTTTCACTTTAGTTT
GCTTTCGGAGCGGTAAACTGACGATTAGCAATAATCACGATACGATTTACTGTGACGAACCTGGGATGTTGGTGCTCAAA
AAAGAGCAGGTAGTTAACGTGACGCTTGAAGAGGTCAATGGCCACATGGATTTCGATATACTCGAGATACCGACGCAACG
ACTTGGCGCTCTCTATGCACTTATCCCAAACGAGCAGCAAACCAAAATGGCGGTACCCACAGAGAAAGCGCAGAAAATCT
TCTATACACCTGACTTTCCTGCCAGAAGAGAGGTATTTGAACATCTGAAAACGGCGTTCTCCTGTACGAAGGATACAAGC
AAAGGTTGCAGTAATTGTAACAACAAAAGTTGTATTGAAAATGAAGAGTTAATTCCTTATTTTCTGCTGTTCCTGCTTAC
TGCTTTTCTCCGACTCCCTGAGAGTTATGAGATCATCCTTAGCTCGGCTCAGATAACGTTAAAGAAGCGCGTTTACAACA
TTATATCTTCGTCACCCAGTAGACAGTGGAAGCTTACGGATGTTGCCGATCATATATTTATGAGTACGTCAACGCTCAAA
CGGAAACTTGCAGAAGAAGGTACCAGCTTTAGCGATATCTACTTATCGGCAAGAATGAATCAGGCAGCAAAACTTTTACG
CATAGGCAACCATAATGTTAATGCTGTAGCATTAAAATGTGGTTATGACAGCACGTCCTACTTCATTCAATGTTTCAAAA
AATATTTTAAAACTACGCCATCGACATTCATAAAAATGGCGAACCATTAA

Protein sequence : 
MENVTFVSNSHQRPAADNLQKLKSLLTNTQQQIKSQTQQVTIKNLYVSSFTLVCFRSGKLTISNNHDTIYCDEPGMLVLK
KEQVVNVTLEEVNGHMDFDILEIPTQRLGALYALIPNEQQTKMAVPTEKAQKIFYTPDFPARREVFEHLKTAFSCTKDTS
KGCSNCNNKSCIENEELIPYFLLFLLTAFLRLPESYEIILSSAQITLKKRVYNIISSSPSRQWKLTDVADHIFMSTSTLK
RKLAEEGTSFSDIYLSARMNQAAKLLRIGNHNVNAVALKCGYDSTSYFIQCFKKYFKTTPSTFIKMANH

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY2996 NP_457269.1 AraC-family transcriptional regulator Not tested SPI-1 Protein 1e-127 100
t2777 NP_806478.1 AraC family transcriptional regulator Not tested SPI-1 Protein 1e-127 100
hilD YP_217794.1 regulatory protein Virulence SPI-1 Protein 3e-127 99
hilD NP_461796.1 invasion protein regulatory protein Virulence SPI-1 Protein 6e-128 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY2996 NP_457269.1 AraC-family transcriptional regulator VFG0537 Protein 3e-128 99