Gene Information

Name : orgAb
Accession : NP_457263.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : cell invasion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 2865811 - 2866482 bp
Length : 672 bp
Strand : -
Note : Similar to C-terminal half of Salmonella typhimurium oxygen-regulated invasion protein OrgA SW:ORGA_SALTY (P40823) (412 aa) fasta scores: E(): 0, 99.5% id in 221 aa, to all of Shigella sonnei Orf10 TR:Q55290 (EMBL:D50601) (231 aa) fasta scores: E(): 6.3e-

DNA sequence :
ATGCTCAAAAATATCCCAATTCCGTCCCCGCTTTCGCCTGTTGAGGGGATACTGATAAAGCGTAAAACGCTGGAACGTTA
TTTCTCTATTGAAAGATTAGAACAGCAGGCGCACCAACGGGCTAAGCGTATTTTGCGAGAGGCGGAAGAAGAGGCAAAGA
CCTTGCGGATGTACGCCTATCAGGAAGGTTACGAGCAGGGAATGATAGACGCGTTACAGCAGGTCGCCGCTTATCTTACT
GATAATCAGACAATGGCCTGGAAGTGGATGGAAAAAATACAGATTTATGCCCGCGAGTTATTTTCAGCAGCGGTCGACCA
TCCCGAAACGCTTTTAACCGTCCTGGATGAGTGGCTAAGGGATTTCGATAAGCCGGAGGGGCAACTTTTTTTAACACTGC
CAGTTAATGCGAAAAAAGAACACCAAAAACTGATGGTGTTGCTTATGGAGAACTGGCCTGGCACTTTTAATCTTAAATAT
CATCAGGAACAGCGCTTTATCATGAGTTGCGGCGATCAGATCGCAGAATTTTCACCTGAACAATTTGTTGAAACAGCAGT
AGGCGTCATTAAGCATCATCTTGATGAACTTCCACAAGACTGCCGGACGATTTCTGATAACGCCATTAACGCACTTATTG
ATGAATGGAAGACAAAAACGCAAGCATTGTAA

Protein sequence :
MLKNIPIPSPLSPVEGILIKRKTLERYFSIERLEQQAHQRAKRILREAEEEAKTLRMYAYQEGYEQGMIDALQQVAAYLT
DNQTMAWKWMEKIQIYARELFSAAVDHPETLLTVLDEWLRDFDKPEGQLFLTLPVNAKKEHQKLMVLLMENWPGTFNLKY
HQEQRFIMSCGDQIAEFSPEQFVETAVGVIKHHLDELPQDCRTISDNAINALIDEWKTKTQAL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
orgA NP_806472.1 oxygen-regulated invasion protein Virulence SPI-1 Protein 6e-103 100
orgAb NP_457263.1 cell invasion protein Virulence SPI-1 Protein 6e-103 100
orgB YP_217788.1 flagellar biosynthesis/type III secretory pathway protein Not tested SPI-1 Protein 2e-102 99
orgB NP_461790.1 needle complex export protein Virulence SPI-1 Protein 2e-102 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
orgAb NP_457263.1 cell invasion protein VFG0532 Protein 6e-103 99