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Name : sitD Accession : NP_457258.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : Iron transport protein, inner membrane component Function : - COG functional category : P : Inorganic ion transport and metabolism COG ID : COG1108 EC number : - Position : 2861845 - 2862693 bp Length : 849 bp Strand : + Note : Similar to Salmonella typhimurium SitD an iron transport protein located on centisome 63 pathogenicity island TR:Q9XCR9 (EMBL:AF128999) (282 aa) fasta scores: E(): 0, 99.3% id in 282 aa, and to Yersinia pestis chelated iron transport system membrane prote DNA sequence : ATGTTCTTAGCAACGTTACTGGAACCCTTTCAGTTTGATTTTATGGTGAACGCCCTTATGGTTTCGGTCATTGTGGCGAT TCCCTGCGCCTTGCTGTCCGTGTTTTTAGTGTTAAAAGGCTGGGCGTTAATGGGCGACGCAATGAGTCATGCGGTATTCC CCGGGGTCGTGCTGGCATATATTGTGGGGATTCCCCTGGCGATTGGCGCTTTCATTGCCGGATTATTTTGCGCTATCGCC ACCGGTTATCTGGACGATAACAGCCGCATCAAACGTGATACGGTGATGGGCATCGTCTTTTCCGGGATGTTTGGCGCAGG TCTGGTGCTCTATGTTTCTATTCAATCGGAAGTGCATCTGGATCACATCCTGTTTGGGGATATGCTGGGCGTATCGCTGG GGGATATCGTACAAACGTCGGTTATTGCACTGGGTATTGCGTTAATCATAGGGCTGAAATGGAAAGATCTCCTGCTACAC GCTTTTGACCCGCACCAGGCGAAAGCCAGCGGGCTGAATACGACGCTACTGCATTATGGCCTGCTATGTATGATTGCGCT GACTATCGTCGCCACGCTGAAATCGGTGGGCATTATTCTGTCGATTTCATTGCTTATCGCCCCCGGCGCAATTGCCATTT TGCTGACGCGACGCTTTGCGCGCGCGCTGGGATTAGCGGTGAGTCTGTCAGTTATTACCGCTTTTGCGGGCGTCTATCTG TCTTTTTATCTTGATAGCGCGCCAGCGCCGACCATCGTGGTATTATTTGCCATCGTGTTTATTGCGGTATTTATTTACGC AACATGGCGCGACAGGCGTAATGAAATCGTACCAGAGGCGCAAGGTTAA Protein sequence : MFLATLLEPFQFDFMVNALMVSVIVAIPCALLSVFLVLKGWALMGDAMSHAVFPGVVLAYIVGIPLAIGAFIAGLFCAIA TGYLDDNSRIKRDTVMGIVFSGMFGAGLVLYVSIQSEVHLDHILFGDMLGVSLGDIVQTSVIALGIALIIGLKWKDLLLH AFDPHQAKASGLNTTLLHYGLLCMIALTIVATLKSVGIILSISLLIAPGAIAILLTRRFARALGLAVSLSVITAFAGVYL SFYLDSAPAPTIVVLFAIVFIAVFIYATWRDRRNEIVPEAQG |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 6e-103 | 100 |
| sitD | NP_806467.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 6e-103 | 100 |
| sitD | AAD41068.1 | SitD | Virulence | centisome 63 pathogenicity island | Protein | 5e-103 | 99 |
| sitD | YP_217784.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 8e-103 | 99 |
| sitD | NP_461785.1 | permease | Virulence | SPI-1 | Protein | 7e-103 | 99 |
| sitC | AAD41067.1 | SitC | Virulence | centisome 63 pathogenicity island | Protein | 8e-34 | 41 |
| sitC | YP_217783.1 | iron transporter: fur regulated | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_461784.1 | permease | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_457257.1 | Iron transport protein, inner membrane component | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| sitC | NP_806466.1 | iron transporter inner membrane protein | Virulence | SPI-1 | Protein | 1e-33 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | BAC0352 | Protein | 3e-103 | 99 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | BAC0442 | Protein | 6e-55 | 54 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | BAC0441 | Protein | 6e-34 | 43 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | BAC0351 | Protein | 5e-34 | 41 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | VFG0528 | Protein | 3e-103 | 99 |
| sitD | NP_457258.1 | Iron transport protein, inner membrane component | VFG0527 | Protein | 4e-34 | 41 |
