Gene Information

Name : STY2205
Accession : NP_456556.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Unknown
Product : UmuC protein
Function : -
COG functional category : L : Replication, recombination and repair
COG ID : COG0389
EC number : -
Position : 2043481 - 2044749 bp
Length : 1269 bp
Strand : -
Note : Similar to Salmonella typhimurium UmuC protein umuC SW:UMUC_SALTY (P22494) (422 aa) fasta scores: E(): 0, 98.8% id in 422 aa; Orthologue of E. coli umuC (UMUC_ECOLI); Fasta hit to UMUC_ECOLI (422 aa), 83% identity in 422 aa overlap

DNA sequence :
ATGTTCGCGCTCTGCGATGTTAATAGCTTTTACGCCTCCTGCGAAACGGTCTTTCGTCCTGATTTATGTGGCCGACCGGT
GGTGGTGTTATCAAACAATGATGGCTGCGTTATCGCGTGTAGCGCCGAGGCGAAACAACTCGGTATCGCAGCAGGTGAGC
CATACTTCAAACAGAAAGAACGCTTCCGGCGATCCGGTGTTGTTTGCTTCAGCAGTAATTACGAGCTTTACGCTGATATG
TCGAACCAGGTAATGACCACACTAGAGGAGATGGTGCCGCGGGTAGAAATTTACAGCATTGATGAGGCTTTTTGTGATCT
GACGGGGGTACGAAACTGCCGGGATCTGACAGATTTCGGGCACGAGATAAGAGCGACGGTCCTGAAGCGCACGCACCTGA
CTGTCGGTGTAGGCATTGCCCAGACGAAAACCCTTGCCAAGCTGGCTAACCATGCTGCGAAAAAGTGGCAGCGCCAGACC
GACGGGGTGGTTGACCTGTCGAACATCGATCGCCAGCGTCGGCTGCTGGCCCTGATACCCGTAGAGGATGTCTGGGGTGT
CGGCAGACGCATCAGTAAGAAGCTCAATGCCCTGGGCATCAAGACTGCTCTCGATCTCTCTGAACAAAGTACCTGGATCA
TCAGGAAACACTTCAATGTCGTGCTGGAGCGTACCGTGAGAGAGCTTCGCGGAGAGCCATGTCTGGAGCTTGAAGAGTTT
GCGCCGGCAAAGCAGGAAATCGTTTGTAGCCGCTCTTTCGGCGAGCGGGTCACAGACTATGAGGAAATGCGCCAGGCTGT
TTACAGCTACGCTGCGCGCGCGGCAGAAAAACTCCGCGGCGAGCACCAGTACTGCTGTTTCATTTCAACATTCGTCAAAA
CATCACCCTTTGCCCTGAACGAGCCCTACTACGGTAACAGCGCCGCGGTGACGCTTCTCACCCCCACGCAGGATTCACGT
GACATTATCAATGCGGCTGTGAAATGTCTGGATAAAATCTGGCGCGACGGCCATCGCTACCAGAAAGCGGGGGTGATGCT
GGGTGGCTTCTTCAGCCAGGGCGTAGCGCAACTCAACCTTTTCGACGATAACGCGCCGCGCGCCGGTAGTGCGAAGTTGA
TGGAAGTACTGGACCATCTTAACGCAAAAGACGGGAAGGGGACGCTGTACTTCGCCGGGCAGGGGATGTCGCAACAGTGG
GCTATGAAGCGAGAAATGCTTTCGCCTCGGTACACCACAAGATACTCTGATCTACTGCGTGTTAAGTAA

Protein sequence :
MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAAGEPYFKQKERFRRSGVVCFSSNYELYADM
SNQVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGHEIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT
DGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEF
APAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCCFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSR
DIINAAVKCLDKIWRDGHRYQKAGVMLGGFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQW
AMKREMLSPRYTTRYSDLLRVK

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
samB NP_458681.1 UV protection protein Not tested SPI-7 Protein 7e-121 62
umuC NP_807889.1 DNA polymerase V subunit UmuC Not tested SPI-7 Protein 7e-121 62
rulB CAI36137.1 nucleotidyltransferase/DNA polymerase Not tested PPHGI-1 Protein 6e-89 50
unnamed ABR13403.1 DNA-directed DNA polymerase Not tested PAGI-5 Protein 2e-76 49