Gene Information

Name : STY1730
Accession : NP_456138.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative transcriptional regulator
Function : -
COG functional category : K : Transcription
COG ID : COG0789
EC number : -
Position : 1650681 - 1651409 bp
Length : 729 bp
Strand : +
Note : Similar to Salmonella typhimurium Orf 242 protein orf 242 TR:Q9Z4T3 (EMBL:AJ224978) (242 aa) fasta scores: E(): 0, 98.8% id in 242 aa, and to Escherichia coli hypothetical transcriptional regulator in metG-dld intergenic region yehV SW:YEHV_ECOLI (P33358)

DNA sequence :
ATGTCGTATTCTATCGGCGAATTTGCCAGACTATGCGGTATCAATGCCGCCACGCTAAGGGCATGGCAGCGACGCTATGG
TTTATTGAAACCGCAGCGTACTGATGGCGGGCATCGCTTATACAGCGATGACGATATTCGACAAGCGCTTAGCATCCTCG
ACTGGGTGAGAAAAGGCGTACCGATAAGTCAGGTCAAACCCTTACTGTCGCGTCCGGTCATTCGCCTGGGCGATAACTGG
ATAACGATTCAGGAGACGATGCTTCAACATCTCCACGAAGGGCGAATTGACGCGCTGCGGCAGTTGATTTATGACTGTGG
CCGGGAATATCCCCGCGCAGAACTGGTGACCCATTTATTGCGTCCGTTGCGCAGCAAAGTGTCCGCGCATCTTCCCGCCG
TGATGACGCTGCGCGAAATATTGGATGGCATCATTATTGCCTACACCTCTTTTTGCCTTGAAGGCGACAGAAAAGCGCCT
GGCAACAATGCTTTTATTAGCGGATGGCATCTCTCGGATCACTGTGAAATCTGGCTGGAAGCGTTGACTCGTACCGGACA
AGAGCTGCGGCTCAATGTGCTTCCCTCTCCACCAGCCGTTCTGGCGCCCGAGCTGTTCGCCCAGAGAAAATGGTTCCTGG
TGACCACCGGCAAGCTCACTGCCGGGCAGAAAAAACAGCTTGCCCAGTGGCGCAACGTGGTCGCTTCGCTGGAGGTTATC
ACACTATAA

Protein sequence :
MSYSIGEFARLCGINAATLRAWQRRYGLLKPQRTDGGHRLYSDDDIRQALSILDWVRKGVPISQVKPLLSRPVIRLGDNW
ITIQETMLQHLHEGRIDALRQLIYDCGREYPRAELVTHLLRPLRSKVSAHLPAVMTLREILDGIIIAYTSFCLEGDRKAP
GNNAFISGWHLSDHCEIWLEALTRTGQELRLNVLPSPPAVLAPELFAQRKWFLVTTGKLTAGQKKQLAQWRNVVASLEVI
TL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator Not tested SPI-2 Protein 1e-111 100
t1258 NP_805061.1 transcriptional regulator Not tested SPI-2 Protein 1e-111 100
SC1411 YP_216398.1 MerR family transcriptional regulator Not tested SPI-2 Protein 2e-110 99
orf242 NP_460355.1 regulatory protein Not tested SPI-2 Protein 6e-111 99
ORF 242 CAB37409.1 - Not tested SPI-2 Protein 5e-111 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY1730 NP_456138.1 putative transcriptional regulator VFG0491 Protein 3e-111 99