Gene Information

Name : ssaE
Accession : NP_456132.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1643332 - 1643574 bp
Length : 243 bp
Strand : -
Note : Similar to Salmonella typhimurium putative secretory apparatus component SsaE TR:O84943 (EMBL:AF020808) (80 aa) fasta scores: E(): 3.7e-29, 98.8% id in 80 aa

DNA sequence :
ATGACAACTCTGACCCGGTTAGAAGATTTGCTGCTTCATTCGCGTGAAGAGGCCAAAGGCATAATTTTACAATTAAGGGC
TGCCCGGAAACAGTTAGAAGAGAACAACGGTAGGTTACAGGATCCGCAGCAATATCAGCAAAACACCTTATTGCTTGAAG
CGATCGAGCAGGCCGAAAATATCATCAACATTATTTATTATCGTTACCATAACAGCGCACTTGTAGTGAGTGAGCAAGAG
TAA

Protein sequence :
MTTLTRLEDLLLHSREEAKGIILQLRAARKQLEENNGRLQDPQQYQQNTLLLEAIEQAENIINIIYYRYHNSALVVSEQE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaE NP_456132.1 putative secretion system protein Virulence SPI-2 Protein 9e-20 100
ssaE NP_805067.1 secretion system protein Virulence SPI-2 Protein 9e-20 100
ssaE NP_460361.1 secretion system effector Virulence SPI-2 Protein 1e-19 99
ssaE YP_216404.1 secretion system effector protein SsaE Virulence SPI-2 Protein 1e-19 99
ssaE AAC28877.1 putative secretory apparatus component Virulence SPI-2 Protein 1e-19 99
ssaE CAA12183.1 SsaE Virulence SPI-2 Protein 1e-19 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaE NP_456132.1 putative secretion system protein VFG0497 Protein 4e-20 99