Gene Information

Name : sseA
Accession : NP_456131.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1642803 - 1643129 bp
Length : 327 bp
Strand : -
Note : Similar to Salmonella typhimurium SseA TR:O84944 (EMBL:AF020808) (108 aa) fasta scores: E(): 0, 99.1% id in 108 aa

DNA sequence : 
ATGATGATAAAGAAAAAGGCTGCGTTTAGTGAATATCGTGATTTAGAGCAAAGTTACATGCAGCTAAATCACTGTCTTAA
AAAATTTCACCAAATCCGGGCTAAGGTGAGTCAACAGCTTGCTGAAAGGGCAGAGAGCCCCAAAAAGAGCAGAGAGACAG
AGAGTATTCTTCATAACCTATTTCCACAAGGCGTTGCCGGGGTTAACCAGGAGGCCGAGAAGGATTTAAAGAAAATAGTA
AGTTTGTTTAAACAACTTGAAGTACGACTGAAACAACTTAATGCTCAAGCCCCGGTGGAGATACCGTCAGGAAAAACAAA
AAGGTAA

Protein sequence : 
MMIKKKAAFSEYRDLEQSYMQLNHCLKKFHQIRAKVSQQLAERAESPKKSRETESILHNLFPQGVAGVNQEAEKDLKKIV
SLFKQLEVRLKQLNAQAPVEIPSGKTKR

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseA YP_216405.1 secretion system effector protein SseA Virulence SPI-2 Protein 3e-46 100
sseA NP_456131.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-46 100
sseA NP_805068.1 pathogenicity island protein Virulence SPI-2 Protein 3e-46 100
sseA NP_460362.1 secretion system chaperone protein Virulence SPI-2 Protein 6e-46 99
sseA AAC28878.1 SseA Virulence SPI-2 Protein 4e-46 99
sseA CAA12184.1 SseA Virulence SPI-2 Protein 4e-46 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseA NP_456131.1 putative pathogenicity island protein VFG0498 Protein 2e-46 99