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Name : sseC Accession : NP_456128.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : putative pathogenicity island effector protein Function : - COG functional category : S : Function unknown COG ID : COG5613 EC number : - Position : 1640279 - 1641733 bp Length : 1455 bp Strand : - Note : Similar to Salmonella typhimurium SseC TR:O84947 (EMBL:AF020808) (484 aa) fasta scores: E(): 0, 95.2% id in 484 aa DNA sequence : ATGAATCGAATTCACAGTAATAGCGATAGCGCCGCAGGAGTAACCGCCTTAACACATCATCACTTAAGCAATGTCAGTTG CGTTTCCTCGGGTTCGCTGGGAAAGCGCCAGCATCGTGTGAATTCTACTTTTGGCGATGGCAACGCCGCGTGTCTGCTAT CCGGGAAAATTAGTCTTCAGGAGGCAAGCAATGCGTTGAAGCAACTGCTTGATGCCGTACCCGGAAATCATAAGCGTCCA TCATTGCCTGACTTTTTGCAGACCAATCCCGCGGTTTTATCAATGATGATGACGTCATTAATACTCAACGTCTTTGGTAA TAACGCTCAATCGTTATGCCAACAGCTTGAGCGGGCAACTGAGGTGCAAAATGCATTACGTAATAAGCAGGTAAAGGAGT ATCAGGAGCAGATCCAGAAAGCGATAGAGCAGGAGGATAAAGCGCGTAAAGCGGGTATTTTTGGCGCTATTTTTGACTGG ATTACCGGCATATTTGAAACCGTGATTGGCGCCTTAAAAGTTGTGGAAGGTTTTCTGTCCGGTAATCCCGCAGAAATGGC TAGCGGCGTAGCTTATATGGCCGCAGGTTGTGCAGGAATGGTTAAAGCCGGAGCCGAAACGGCAATGATGTGCGGTGCTG ACCACGATACCTGTCAGGCGATTATTGACGTGACAAGTAAGATTCAATTTGGTTGTGAAGCCGTCGCGCTGGCACTGGAT GTTTTCCAGATTGGCCGTGCTTTTATGGCGACGAGAGGTTTATCTGGCGCAGCTGCAAAAGTGCTTGACTCCGGTTTTGG CGAGGAAATGGTTGAGCGTATGGTTGGTGCAGGGGAAGCAGAAATAGAGGCGTTGGCTGAAAAGTTTGGCGAAGAAGTGA GCGAAAGTTTTTCCAAACAATTTGAGCCGCTTGAACGTGAAATGGTTTCGCCGGGCGAGATGGAAGAGGAGTCTGCCGAA TTTTCTCGTAACGTAGAAAAAAATATGACAAAAAATGCGGGAAAAAGTTTTACGAAAGAGGGGGTGAAAGCCATGGCAAA AGAAGCGGTAAAAGAAGCCCTGGAAAAATATGCGCAAGAAGGGGAAAAGTTTCTGTTAAAAAATTTTCGTAATAAAGTTC TCTTCAATATGTTCAAAAAAATCCTGTATGCCTTACTGAGGGATTGTTCATTTAAAGGCTTACAGGCTATCAGATGTGCA ACCGAGGGTGCCAATCAGATGAATACTGGCATGGTTAACACAGAAAAAGCGAAGCTTGAAAAGAAAATAGAGCAATTAAT AACTCAGCAACGGTTTCTGGATTTCATAATGCAACAAACGGATGACCAAAAAAAGATAGAACAAAAACGCTTAGAGGGGC TTTATAAAGGTAGCGGTGCCGCGCTTAGAGGTGTATTAGATACCATTGATCACTATAGTAGCGTTCAGGCGAGAATAGCT GGCTGGCGCGCTTAA Protein sequence : MNRIHSNSDSAAGVTALTHHHLSNVSCVSSGSLGKRQHRVNSTFGDGNAACLLSGKISLQEASNALKQLLDAVPGNHKRP SLPDFLQTNPAVLSMMMTSLILNVFGNNAQSLCQQLERATEVQNALRNKQVKEYQEQIQKAIEQEDKARKAGIFGAIFDW ITGIFETVIGALKVVEGFLSGNPAEMASGVAYMAAGCAGMVKAGAETAMMCGADHDTCQAIIDVTSKIQFGCEAVALALD VFQIGRAFMATRGLSGAAAKVLDSGFGEEMVERMVGAGEAEIEALAEKFGEEVSESFSKQFEPLEREMVSPGEMEEESAE FSRNVEKNMTKNAGKSFTKEGVKAMAKEAVKEALEKYAQEGEKFLLKNFRNKVLFNMFKKILYALLRDCSFKGLQAIRCA TEGANQMNTGMVNTEKAKLEKKIEQLITQQRFLDFIMQQTDDQKKIEQKRLEGLYKGSGAALRGVLDTIDHYSSVQARIA GWRA |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| sseC | NP_456128.1 | putative pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 100 |
| sseC | NP_805071.1 | pathogenicity island effector protein | Virulence | SPI-2 | Protein | 0.0 | 100 |
| sseC | CAA12187.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 96 |
| sseC | AAC28881.1 | SseC | Virulence | SPI-2 | Protein | 0.0 | 96 |
| sseC | NP_460365.1 | translocation machinery component | Virulence | SPI-2 | Protein | 0.0 | 96 |
| sseC | YP_216408.1 | secretion system effector protein SseC | Virulence | SPI-2 | Protein | 0.0 | 96 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| sseC | NP_456128.1 | putative pathogenicity island effector protein | VFG0501 | Protein | 0.0 | 96 |
