Gene Information

Name : sseE
Accession : NP_456126.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative pathogenicity island effector protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1639257 - 1639673 bp
Length : 417 bp
Strand : -
Note : Similar to Salmonella typhimurium SseE TR:O84949 (EMBL:AF020808) (138 aa) fasta scores: E(): 0, 99.3% id in 138 aa

DNA sequence : 
ATGGTGCAAGAAATAGAGCAATGGTTGCGTCGGCATCAGGTGTTTACTGAGCCTGCATATTTAGGGGAGACCGCCATATT
ACTTGGGCAGCAGTTTATATTATCGCCTTACCTGGTGATCTATCGTATTGAGGCAAAAGAAATGATTATTTGTGAGTTCA
GGCGCCTGACGCCCGGGCAACCTCGACCACAGCAATTGTTTCACTTACTGGGACTTTTACGCGGGATATTTGTGCATCAC
CCGCAGTTAACATGTTTAAAGATGTTGATAATCACCGACGTTCTGGATGAAAAAAAAGCTATGCTACGCAGGAAATTATT
GCGCATCCTGACAGTAATGGGAGCGACCTTTACACAGCTTGATGGCGATAACTGGACAATTTTATCCGCCGAGCATCTTA
TCCAGCGACGTTTTTAA

Protein sequence : 
MVQEIEQWLRRHQVFTEPAYLGETAILLGQQFILSPYLVIYRIEAKEMIICEFRRLTPGQPRPQQLFHLLGLLRGIFVHH
PQLTCLKMLIITDVLDEKKAMLRRKLLRILTVMGATFTQLDGDNWTILSAEHLIQRRF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
sseE NP_456126.1 putative pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 100
sseE NP_805073.1 pathogenicity island effector protein Virulence SPI-2 Protein 1e-62 100
sseE AAC28883.1 SseE Virulence SPI-2 Protein 7e-63 99
sseE CAA12189.1 SseE Virulence SPI-2 Protein 7e-63 99
sseE YP_216410.1 secretion system effector SseE Virulence SPI-2 Protein 1e-62 99
sseE NP_460367.1 secreted effector protein Virulence SPI-2 Protein 1e-62 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
sseE NP_456126.1 putative pathogenicity island effector protein VFG0503 Protein 3e-63 99