Gene Information

Name : ssaH
Accession : NP_456121.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1636710 - 1636937 bp
Length : 228 bp
Strand : -
Note : Similar to Salmonella typhimurium SsaH TR:Q9ZEF4 (EMBL:AJ224892) (75 aa) fasta scores: E(): 1.2e-29, 98.7% id in 75 aa

DNA sequence : 
ATGTTTGCGGGCGTTAACCATAGCCTGATTTCCCAGGTACATGCGATGTTACCAGCGCTAACGGTTATTGTTCCGGATAA
AAAATTACAGTTGGTATGTTTGGCATTATTGTTGGCGGGTTTAAATGAGCCGTTAAAGGCCGCGAAAATTTTATCGGATA
TTGATTTGCCAGAGGCTATGGCGCTACGAATGTTATTTCCTGCACCAAATGAGGGGTTTGAAAATTGA

Protein sequence : 
MFAGVNHSLISQVHAMLPALTVIVPDKKLQLVCLALLLAGLNEPLKAAKILSDIDLPEAMALRMLFPAPNEGFEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaH NP_456121.1 putative pathogenicity island protein Virulence SPI-2 Protein 8e-17 100
ssaH NP_805078.1 pathogenicity island protein Virulence SPI-2 Protein 8e-17 100
ssaH AAX49621.1 SsaH Virulence SPI-2 Protein 1e-16 99
ssaH NP_460372.1 type III secretion system apparatus protein Virulence SPI-2 Protein 2e-16 99
ssaH CAA12194.1 SsaH Virulence SPI-2 Protein 1e-16 99
ssaH YP_216415.1 secretion system apparatus protein SsaH Virulence SPI-2 Protein 1e-16 99
ssaI AAC28875.1 SsaI Virulence SPI-2 Protein 8e-16 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaH NP_456121.1 putative pathogenicity island protein VFG0508 Protein 5e-17 99