Gene Information

Name : ssaI
Accession : NP_456120.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative pathogenicity island protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1636450 - 1636698 bp
Length : 249 bp
Strand : -
Note : Similar to Salmonella typhimurium SsaI TR:Q9ZEF3 (EMBL:AJ224892) (82 aa) fasta scores: E(): 4.8e-29, 95.1% id in 81 aa

DNA sequence : 
ATGAGCATAGTGCCTGTAAGCACTCAATCTTATGTAAAGTCCTTTGCAGAACCGAGCCAGGAGCAAATTAATTTTTTTAA
ACAATTGCTGAAAGATGAAGCATCCACCAGTAACGCCAGTGCTTTATTACCGCAGGTTATGTTGACCAGACAAATGGATT
ATATGCAGTTAACGGTAGGCGTCGATTATCTTGCCAGAATATCAGGCGCAGCATCGCAAGCGCTTAATAAGCTGGATAGC
ATGACATGA

Protein sequence : 
MSIVPVSTQSYVKSFAEPSQEQINFFKQLLKDEASTSNASALLPQVMLTRQMDYMQLTVGVDYLARISGAASQALNKLDS
MT

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaI NP_456120.1 putative pathogenicity island protein Virulence SPI-2 Protein 3e-32 100
ssaI NP_805079.1 pathogenicity island protein Virulence SPI-2 Protein 3e-32 100
ssaI CAA12195.1 SsaI Virulence SPI-2 Protein 2e-30 94
ssaI AAX49622.1 SsaI Virulence SPI-2 Protein 2e-30 94
ssaI NP_460373.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-30 94
ssaI YP_216416.1 secretion system apparatus protein SsaI Virulence SPI-2 Protein 3e-29 91

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaI NP_456120.1 putative pathogenicity island protein VFG0509 Protein 1e-30 94