Gene Information

Name : ssaL
Accession : NP_456116.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative secretion system protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1633485 - 1634477 bp
Length : 993 bp
Strand : -
Note : Similar to Salmonella typhimurium secretion system apparatus protein SsaL SW:SSAL_SALTY () (338 aa) fasta scores: E(): 0, 97.6% id in 330 aa. Note discrepency in predicted translational start site.

DNA sequence : 
ATGAATATTAAAATTAATGAGATAAAAATGACGCCCCCTACAGCATTTACCCCTGGCCTGGTTATAGAGGAACAAGAGGT
TATTTCGCCTTCAATGTTAGCTCTCCATGAGTTACAGGAAACGGCGGGGGCAGCGCTCTATGAGACGATGGAAGAAATAG
GAATGGCGCTGAGTGGTAAACTGCGCGAAAGTAATAAATTCACTGATGCTGAGAAACTGGAGCGCAGGCAGCAGGCTTTG
CTGCGTTTGATAAAACAAATACAGGAGGATAATGGGGCAGCGTTGCGTCCGCTTACCGAAGAGAATAGTGATCCTGATTT
ACAGAATGCGTATCAAATTATCGCTCTTGCAATGGCGCTTACTGCCGGCGGGTTGTCAAAAAAGAAAAAACGCGATTTGC
AATCGCAACTGGATACGCTTACAGCGGAGGAGGGATGGGAACTTGCCGTTTTTAGTTTACTGGAACTTGGCGAAGTGGAT
ACCGCTACGCTGTCCTCGCTGAAGCGTTTTATGCAACAGGCGATAGACAACGATGAAATGCCCTTATCGCAGTGGTTCAG
ACGCGTGGCAGACTGGCCGGATCGCGGTGAACGGGTCCGTATTTTGCTAAGAGCAATAGCCTTTGAACTTAGCATATGCA
TCGAACCCTCGGAGCAAAGTCGTTTGGCCGCAGCATTAGTACGCTTGCGTCGTTTGTTGTTATTCCTTGGCCTTGAAAAA
GAGTGCCAGCGTGAGGAGTGGATTTGCCAGTTGCCGCCTAATACATTACTGCCGCTACTACTCGATATCATTTGTGAGCG
CTGGCTTTTCAGCGATTGGTTGCTTGATAGACTTACCGCTATAGTTTCTTCATCGAAGATGTTCAATCGGTTACTCCAAC
AACTTGATGCGCAGTTTATGCTGATACCCGATAACTGTTTTAACGACGAAGATCAACGTGAACAAATTCTCGAAACGCTT
CGTGAAGTAAAGATAAATCAGGTTTTATTCTGA

Protein sequence : 
MNIKINEIKMTPPTAFTPGLVIEEQEVISPSMLALHELQETAGAALYETMEEIGMALSGKLRESNKFTDAEKLERRQQAL
LRLIKQIQEDNGAALRPLTEENSDPDLQNAYQIIALAMALTAGGLSKKKKRDLQSQLDTLTAEEGWELAVFSLLELGEVD
TATLSSLKRFMQQAIDNDEMPLSQWFRRVADWPDRGERVRILLRAIAFELSICIEPSEQSRLAAALVRLRRLLLFLGLEK
ECQREEWICQLPPNTLLPLLLDIICERWLFSDWLLDRLTAIVSSSKMFNRLLQQLDAQFMLIPDNCFNDEDQREQILETL
REVKINQVLF

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaL NP_456116.1 putative secretion system protein Virulence SPI-2 Protein 3e-131 100
ssaL NP_805083.1 secretion system protein Virulence SPI-2 Protein 3e-131 100
ssaL YP_216420.1 secretion system apparatus protein SsaL Virulence SPI-2 Protein 2e-127 98
ssaL NP_460377.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-128 98
ssaL CAA70534.1 secretion system apparatus Virulence SPI-2 Protein 3e-128 98

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaL NP_456116.1 putative secretion system protein VFG0512 Protein 2e-128 98