Gene Information

Name : ssaP
Accession : NP_456111.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : putative type III secretion protein
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1629003 - 1629377 bp
Length : 375 bp
Strand : -
Note : Similar to Salmonella typhimurium secretion system apparatus protein SsaP SW:SSAP_SALTY (P74859) (124 aa) fasta scores: E(): 0, 100.0% id in 113 aa. Note the overlap with the upstream CDS and the alternative translational start site at codon 10

DNA sequence : 
ATGCGTATTACCAAAGTTGAGGGAAGTCTTGGGTTGCCATGCCAGTCTTATCAGGATGATAACGAGGCGGAGGCGGAACG
TATGGACTTTGAACAACTCATGCACCAGGCATTACCCATTGGTGAGAATAATCCTCCTGCAGCATTGAATAAGAACGTGG
TTTTCACGCAACGTTATCGTGTTAGTGGCGGTTATCTTGACGGTGTAGAGTGTGAAGTCTGTGAGTCAGGAGGGCTAATC
CAGTTAAGAATCAATGTCCCTCATCATGAAATTTACCGTTCGATGAAAGCGCTAAAGCAGTGGCTGGAGTCTCAGTTGCT
GCATATGGGGTATATAATTTCCCTGGAGATATTCTATGTTAAGAATAGCGAATGA

Protein sequence : 
MRITKVEGSLGLPCQSYQDDNEAEAERMDFEQLMHQALPIGENNPPAALNKNVVFTQRYRVSGGYLDGVECEVCESGGLI
QLRINVPHHEIYRSMKALKQWLESQLLHMGYIISLEIFYVKNSE

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
ssaP AAX49619.1 SsaP Virulence SPI-2 Protein 2e-45 100
ssaP CAA70539.1 secretion system apparatus Virulence SPI-2 Protein 3e-55 100
ssaP NP_456111.1 putative type III secretion protein Virulence SPI-2 Protein 4e-55 100
ssaP NP_805088.1 type III secretion protein Virulence SPI-2 Protein 4e-55 100
ssaP NP_460382.1 type III secretion system apparatus protein Virulence SPI-2 Protein 4e-55 100
ssaP YP_216425.1 secretion system apparatus protein SsaP Virulence SPI-2 Protein 1e-54 99

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
ssaP NP_456111.1 putative type III secretion protein VFG0517 Protein 1e-55 100