Gene Information

Name : STY1541
Accession : NP_455961.3
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Resistance
Product : multiple antibiotic resistance protein MarA
Function : -
COG functional category : -
COG ID : -
EC number : -
Position : 1494880 - 1495314 bp
Length : 435 bp
Strand : +
Note : Orthologue of E. coli marA (MARA_ECOLI); Fasta hit to MARA_ECOLI (129 aa), 95% identity in 128 aa overlap

DNA sequence : 
TTGAGTATTTGCTCAAGAAAATTCTGCCGTAGACAAAAAAGAGGTATGACGATGTCCAGACGCAACACTGACGCTATTAC
TATTCATAGCATTTTGGACTGGATCGAGGATAACCTGGAGTCGCCGCTCTCACTGGAAAAAGTGTCTGAGCGTTCAGGAT
ATTCCAAATGGCACCTGCAACGGATGTTTAAAAAAGAGACCGGTCATTCATTAGGTCAATACATCCGCAGCCGTAAGATG
ACGGAAATCGCGCAAAAATTAAAAGAGAGCAACGAGCCCATTCTCTATCTGGCGGAACGCTATGGCTTTGAGTCACAGCA
AACATTGACCCGGACGTTCAAAAACTATTTTGATGTGCCGCCACACAAATACCGGATCACCAATATGCATGGCGAATCAC
GGTATATGCTGCCGCTGAACCATGGCAACTACTAG

Protein sequence : 
MSICSRKFCRRQKRGMTMSRRNTDAITIHSILDWIEDNLESPLSLEKVSERSGYSKWHLQRMFKKETGHSLGQYIRSRKM
TEIAQKLKESNEPILYLAERYGFESQQTLTRTFKNYFDVPPHKYRITNMHGESRYMLPLNHGNY

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tetD AEA34665.1 tetracycline resistance protein D Not tested Not named Protein 6e-21 43
tetD AAL08447.1 putative transcriptional regulator TetD Not tested SRL Protein 6e-21 43

• Homologs from CARD and BacMet (resistance genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA CP001138.1.gene1637. Protein 5e-57 100
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA CP000034.1.gene1596. Protein 3e-54 96
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA BAC0560 Protein 2e-53 96
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA NC_002695.1.917339.p Protein 2e-53 96
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA CP001918.1.gene2033. Protein 4e-52 95
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA CP000647.1.gene1624. Protein 7e-52 93
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA NC_010558.1.6276025. Protein 3e-21 43
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA CP001138.1.gene612.p Protein 1e-22 42

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY1541 NP_455961.3 multiple antibiotic resistance protein MarA VFG1038 Protein 2e-21 43