Gene Information

Name : STY1381
Accession : NP_455822.1
Strain : Salmonella enterica CT18
Genome accession: NC_003198
Putative virulence/resistance : Virulence
Product : thiol peroxidase
Function : -
COG functional category : O : Posttranslational modification, protein turnover, chaperones
COG ID : COG2077
EC number : -
Position : 1334414 - 1334920 bp
Length : 507 bp
Strand : -
Note : Orthologue of E. coli tpx (TPX_ECOLI); Fasta hit to TPX_ECOLI (167 aa), 87% identity in 167 aa overlap

DNA sequence :
ATGTCACAGACTGTACATTTCCAGGATAACCCGGTCACCGTTGCCAACGTTATTCCGCAGGCTGGTAGCAAAGCACAGGC
TTTTACTCTTGTCGCAAAAGATTTGTCTGACGTTTCCCTCAGCCAATATGCAGGCAAACGCAAAGTGCTGAATATTTTCC
CAAGCATTGATACTGGCGTATGCGCCGCATCAGTTCGTAAGTTTAATCAACTGGCCACAGAAGTGGAGAATACCGTCGTA
TTGTGCGTTTCTGCTGACCTGCCTTTTGCACAGTCGCGTTTTTGCGGCGCGGAAGGCCTGAGCAACGTTATTACGCTTTC
CACTCTGCGTAATAACGAGTTTCTAAAAAACTACGGCGTCGAAATCGTTGACGGCCCGCTGAAAGGTTTGGCGGCGCGCG
CAGTCATCGTGCTTGACGAAAACGACAACGTTATTTTCAGCCAGTTGGTGGATGAAATCACCCACGAGCCGGATTACGAC
GCCGCGCTTAATGTCCTGAAGGCATAA

Protein sequence :
MSQTVHFQDNPVTVANVIPQAGSKAQAFTLVAKDLSDVSLSQYAGKRKVLNIFPSIDTGVCAASVRKFNQLATEVENTVV
LCVSADLPFAQSRFCGAEGLSNVITLSTLRNNEFLKNYGVEIVDGPLKGLAARAVIVLDENDNVIFSQLVDEITHEPDYD
AALNVLKA

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
tagD AAK20781.1 toxR-activated gene D protein Virulence VPI Protein 6e-35 49
tpx NP_230472.1 thiol peroxidase Virulence VPI-1 Protein 8e-35 49
tagD AAK20751.1 toxR-activated gene D protein Virulence VPI Protein 1e-34 48
tpx YP_001216305.1 thiol peroxidase Not tested VPI-1 Protein 2e-34 48

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
STY1381 NP_455822.1 thiol peroxidase VFG0087 Protein 2e-35 49