|
Name : STY0118 Accession : NP_454713.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Unknown Product : L-ribulose-5-phosphate 4-epimerase Function : - COG functional category : G : Carbohydrate transport and metabolism COG ID : COG0235 EC number : - Position : 118656 - 119351 bp Length : 696 bp Strand : - Note : Fasta hit to SGAE_ECOLI (228 aa), 60% identity in 230 aa overlap; Fasta hit to SGBE_ECOLI (231 aa), 75% identity in 231 aa overlap; Orthologue of E. coli araD (ARAD_ECOLI); Fasta hit to ARAD_ECOLI (231 aa), 95% identity in 231 aa overlap DNA sequence : ATGTTAGAAGATCTCAAACACCAGGTACTGGAAGCCAATCTGGCGCTGCCAAAACACAACCTGGTCACCCTCACCTGGGG TAACGTTAGCGCCGTCGATCGCGAACGCGGCGTACTGGTGATTAAGCCGTCCGGCGTCGATTATAGCGTCATGACCGCTG ACGATATGGTGGTGGTCAGCCTGGAGACCGGTGAAGTCGTTGAAGGTCATAAGAAACCGTCGTCCGATACGCCAACCCAC CGTCTGTTATATCAGGCATTTCCGACTATCGGCAGCATCGTACACACCCATTCGCGCCACGCGACTATCTGGGCGCAGGC GGGTCAGCCGATTCCGGCGACGGGCACCACCCACGCCGACTATTTCTACGGTACGATTCCCTGCACTCGCAAAATGACCG AGGCGGAAATTAATGGCGAGTATGAATGGGAAACGGGCAATGTCATTGTTGAAGCCTTTGAAAAACAAGGCATTAACGCC GCTCAAATGCCCGGCGTGCTTGTCCATTCGCACGGCCCGTTTGCCTGGGGTAAAAATGCCGAGGATGCCGTGCATAACGC CATCGTGCTGGAAGAAGTGGCCTATATGGGGATCTTCTGCCGCCAGCTTGCGCCGCAGTTGCCCGACATGCAGCAATCCC TGCTGGATAAACACTATTTACGCAAACACGGCGCAAAAGCCTATTACGGGCAGTAA Protein sequence : MLEDLKHQVLEANLALPKHNLVTLTWGNVSAVDRERGVLVIKPSGVDYSVMTADDMVVVSLETGEVVEGHKKPSSDTPTH RLLYQAFPTIGSIVHTHSRHATIWAQAGQPIPATGTTHADYFYGTIPCTRKMTEAEINGEYEWETGNVIVEAFEKQGINA AQMPGVLVHSHGPFAWGKNAEDAVHNAIVLEEVAYMGIFCRQLAPQLPDMQQSLLDKHYLRKHGAKAYYGQ |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| araD | YP_281517.1 | L-ribulose-5-phosphate 4-epimerase | Not tested | Not named | Protein | 8e-61 | 57 |
