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Name : pipD Accession : NP_455591.1 Strain : Salmonella enterica CT18 Genome accession: NC_003198 Putative virulence/resistance : Virulence Product : putative secreted peptidase Function : - COG functional category : E : Amino acid transport and metabolism COG ID : COG4690 EC number : - Position : 1091094 - 1092563 bp Length : 1470 bp Strand : - Note : Similar to Salmonella dublin dipeptidase homolog PipD TR:O85304 (EMBL:AF060858) fasta scores: E(): 0, 94.3% id in 407 aa and to Lactobacillus helveticus dipeptidase PepD TR:Q48558 (EMBL:U34257) fasta scores: E(): 0, 28.9% id in 474 aa DNA sequence : ATGAAAAAGTATCTTGCTTTCGCCGTTACGCTGCTGGGTATGGGTAAAGTCATCGCCTGTACTACCCTTTTGGTAGGCAA TCAGGCTTCGGCTGACGGCTCCTTTATTATCGCGCGCAACGAGGATGGCTCGGCAAATAACGCCAAGCATAAGGTTATTC ATCCCGTCGCGTTTCATCAACAAGGCGAGTATAAAGCACATCGCAACAATTTTAGCTGGCCGCTTCCGGAGACAGCGATG CGCTATACGGCGATTCATGACTTTGATACTAACGATAACGCCATGGGTGAAGCCGGTTTCAATTCGGCGGGCGTCGGAAT GAGCGCAACGGAAACCATTTACAACGGCAGAGCGGCGCTGGCTGCCGATCCTTACGTGACAAAAACGGGAATCACGGAAG ACGCCATTGAGTCCGTGATCCTGCCAGTGGCGCAATCGGCGCGTCAGGGCGCCAAATTACTGGGAGATATTATTGAACAA AAAGGCGCGGGCGAAGGTTTCGGCGTCGCGTTTATTGATAGCAAAGAGATATGGTATCTGGAGACGGGAAGCGGACATCA ATGGCTGGCAGTACGACTTCCGGCAGATAGCTATTTCGTTTCCGCCAATCAGGGACGTTTACGCCATTACGATCCGAATG ATAACGCGAATTATATGGCGTCACCAACGTTAGTAAGCTTTGCGAAAAAGCAGGGATTATATGATCCGGCCCGCGGCGAA TTCGACTTTCATCAAGCCTATTCGCAGGATAACAAAAACGATACCACCTATAATTATCCGCGCGTCTGGACGCTACAACA CCAGTTTAATCCGCATCTGGATACGGTCGTTAGCGAAGGGGAAACATTTTCTGTTTTTTTAACGCCAATAACGAAGATCA GCGTGGCGGCAGTAAAAAACGCGTTACGCAATCACTATCAGGGAACGTCGCACGACCCTTATGCCAGTCATAATCCACAA GAACCATGGCGACCTATATCCGTTTTTCGTACCCAGGAGTCACATATTTTACAGGTCAGACCGAAATTACCGCAGGCTAT CGGCAACGTAGAATACATCGCCTATGGAATGCCATCTCTTAGCGTCTATCTCCCCTATTACCAGGGGATGCGTCATTATC AACCCGGAGATGATAAAGGAACCGATCGGGCGAGCAACGACTCTACCTACTGGACATTCCGCACGCTGCAAACACTGGTT ATGCAAGACTACAATACGTTTGCGCCAGATGTGCAACATGCCTGGAAAACATTTGAACAGCAAACAGCTAAGCAACAGTA TAAGATGGAGCAGAGCTATCTGAGATTATATGCGTCGCATCCGAAAGAAGCACAACGCTTACTGCAAAATTTTGAAGATA AAACGATGCAAAATGCGCAGACGCTCGCCCGTCGCCTGACCAATAATATTATTACGACAATGACTTACCGCACAGATATG AAATATCACTTTTCAAGTACGCAGCCATAA Protein sequence : MKKYLAFAVTLLGMGKVIACTTLLVGNQASADGSFIIARNEDGSANNAKHKVIHPVAFHQQGEYKAHRNNFSWPLPETAM RYTAIHDFDTNDNAMGEAGFNSAGVGMSATETIYNGRAALAADPYVTKTGITEDAIESVILPVAQSARQGAKLLGDIIEQ KGAGEGFGVAFIDSKEIWYLETGSGHQWLAVRLPADSYFVSANQGRLRHYDPNDNANYMASPTLVSFAKKQGLYDPARGE FDFHQAYSQDNKNDTTYNYPRVWTLQHQFNPHLDTVVSEGETFSVFLTPITKISVAAVKNALRNHYQGTSHDPYASHNPQ EPWRPISVFRTQESHILQVRPKLPQAIGNVEYIAYGMPSLSVYLPYYQGMRHYQPGDDKGTDRASNDSTYWTFRTLQTLV MQDYNTFAPDVQHAWKTFEQQTAKQQYKMEQSYLRLYASHPKEAQRLLQNFEDKTMQNAQTLARRLTNNIITTMTYRTDM KYHFSSTQP |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| pipD | NP_455591.1 | putative secreted peptidase | Virulence | SPI-5 | Protein | 0.0 | 100 |
| pipD | NP_460067.1 | pathogenicity island-encoded protein D | Virulence | SPI-5 | Protein | 0.0 | 99 |
| pipD | AAC33721.1 | dipeptidase homolog | Virulence | SPI-5 | Protein | 8e-178 | 99 |
| Gene | GenBank Accn | Product | ID of source DB | Alignment Type | E-val | Identity |
| pipD | NP_455591.1 | putative secreted peptidase | VFG0594 | Protein | 0.0 | 99 |
