Gene Information

Name : fepD (STM0592)
Accession : NP_459584.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : iron-enterobactin transporter membrane protein
Function : -
COG functional category : P : Inorganic ion transport and metabolism
COG ID : COG0609
EC number : -
Position : 652565 - 653572 bp
Length : 1008 bp
Strand : -
Note : with FepBCG is involved in the transport of ferric enterobactin

DNA sequence :
ATGTCATGCTCGTTTTCCGTGACGCGCGCGTTTGCCGTGCCCGGATTGTTGTTATTACTGAGTCTCGCCGCGGTTTTAAG
CCTGGTCATTGGCGCGAAACCGCTGCCCGCCGCCGTCGTGCTGGAGGCGTTCACCGGCGTGTGCCAAAGCGCCGATTGCA
CCATCGTCCTGGATGCGCGTTTGCCGCGTACGCTGGCCGGATTACTGGCAGGCGGCGCGTTGGGCCTCGCCGGGGCGCTC
ATGCAAACACTCACTCGCAACCCGCTCGCCGACCCGGGGATTCTGGGCGTTAACAACGGCGCCAGCTTCGCCATTGTACT
GGGCGCGGCGCTGTTTGGTTTCTCCACGCCGCTGGAACAGCTTTTCATGGCATTTAGCGGCGCGCTTATCGCATCACTGA
TTGTCGCCTTCACCGGTAGTCAGGGCGGCGGCCAGTTAAGCCCGGTCCGCCTGACACTGGCGGGCGTGGCGCTTGGCGCG
GTACTGGAAGGATTGACCAGCGGCATCGCGCTGTTAAATCCAGAGGTTTATGATCAGCTTCGCTTCTGGCAGGCGGGATC
GCTGGACATTCGTAGCCTGCAAACGTTGAAAGTCGCGCTTGCGCCCGTGGTTATCGCTGGGATCGTGGCGCTATTTCTGA
GCCGTGCGCTGAATAGCCTGAGCCTCGGCAGCGATACTGCGACGGCGCTGGGGAGTAAAGTGGCGCGCACCCAACTTATC
GGTTTACTGGCGATTACCGTCTTGTGCGGCAGCGCAACGGCGCTGGTCGGCCCTATCGCCTTTATTGGTCTGATGATGCC
GCATATGGCGCGTTGGCTGGTGGGCGCAGACCACCGTTGGTCGCTGCCGGTAACACTACTGGCAACCCCTGCTCTGCTGC
TTTTTGCCGATATTATTGGTCGTCTGTTAGTGCCGGGCGAACTCCGCGTATCGGTCGTCAGTGCGTTTATCGGCGCGCCG
GTACTTATCTTTCTGGTACGCCGTAAATCGAGCGGAGGCGGCCTGTGA

Protein sequence :
MSCSFSVTRAFAVPGLLLLLSLAAVLSLVIGAKPLPAAVVLEAFTGVCQSADCTIVLDARLPRTLAGLLAGGALGLAGAL
MQTLTRNPLADPGILGVNNGASFAIVLGAALFGFSTPLEQLFMAFSGALIASLIVAFTGSQGGGQLSPVRLTLAGVALGA
VLEGLTSGIALLNPEVYDQLRFWQAGSLDIRSLQTLKVALAPVVIAGIVALFLSRALNSLSLGSDTATALGSKVARTQLI
GLLAITVLCGSATALVGPIAFIGLMMPHMARWLVGADHRWSLPVTLLATPALLLFADIIGRLLVPGELRVSVVSAFIGAP
VLIFLVRRKSSGGGL

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
fagA YP_005684490.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 46
fagA YP_005680309.1 hypothetical protein Not tested PiCp 1 Protein 2e-32 46
fagA YP_005682399.1 hypothetical protein Virulence PiCp 1 Protein 2e-32 46
fagA YP_003782432.1 integral membrane protein Virulence PiCp 1 Protein 2e-32 46

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
fepD NP_459584.1 iron-enterobactin transporter membrane protein VFG0926 Protein 9e-102 89