Gene Information

Name : yfdH (STM0558)
Accession : NP_459551.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : glycosyltransferase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0463
EC number : -
Position : 616437 - 617363 bp
Length : 927 bp
Strand : -
Note : similar to Escherichia coli glycan biosynthesis enzyme (AAC75410.1)

DNA sequence :
ATGAAAATCTCGTTAGTCGTTCCGGTCTTCAATGAAGAAGCCACGATACCTATTTTCTATAAAACGGTTCGCGAGTTTGA
AGAGCTAAAACCGTATGAAGTTGAGATTGTTTTCATCAACGATGGAAGCAAAGATGCGACTGAATCAATAATTAACAAAA
TAGCTGCATCTGATCCGCTCGTTATTCCGCTTTCGTTTACGCGAAACTTCGGTAAAGAACCTGCTCTTTTCGCGGGTCTC
GACCATGCAACCGGGGATGCGGTCATTCCTATTGATGTCGATTTACAGGATCCGATAGAAGTAATCCCCCATCTCATTGA
GAAGTGGCAGGCTGGCGCGGATATGGTGCTGGCTAAGCGCTCAGACCGCTCAACTGACGGGCGCATGAAGCGTAAGACAG
CTGAATGGTTTTATAAGCTGCATAATAAAATCAGCAATCCGAAAATTGAAGAGAACGTTGGCGACTTTCGGTTAATGAGT
CGTGAGGTTGTCGAAAATATTAAACAGATGCCAGAACGTAATCTGTTTATGAAAGGCGTTCTGTCATGGGTGGGCGGCAA
GACTGATGTAGTTGAATACGCCCGCGCTGAGCGTGTTGCCGGCGATTCAAAATTCAATGGCTGGAAATTATGGAATCTGG
CGCTGGAAGGAATAACTTCTTTCTCAACATTTCCGCTCCGCATATGGACTTACATTGGATTGTTTATTGCAGGTATGTCA
TTCCTTTACGGTGCATGGATGATTATTGATAAATTAATATTTGGAAATAATGTTCCTGGCTACCCGTCTCTTCTTGTTTC
TGTACTTTTTCTGGGTGGCGTTCAATTGATAGGAATAGGTATTCTTGGGGAATATATTGGCAGGATTTACATAGAAACAA
AAAAAAGGCCTAAGTACATAATTAAGAATGAGAAGAAAAATGGTTAA

Protein sequence :
MKISLVVPVFNEEATIPIFYKTVREFEELKPYEVEIVFINDGSKDATESIINKIAASDPLVIPLSFTRNFGKEPALFAGL
DHATGDAVIPIDVDLQDPIEVIPHLIEKWQAGADMVLAKRSDRSTDGRMKRKTAEWFYKLHNKISNPKIEENVGDFRLMS
REVVENIKQMPERNLFMKGVLSWVGGKTDVVEYARAERVAGDSKFNGWKLWNLALEGITSFSTFPLRIWTYIGLFIAGMS
FLYGAWMIIDKLIFGNNVPGYPSLLVSVLFLGGVQLIGIGILGEYIGRIYIETKKRPKYIIKNEKKNG

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
gtrBI AAF09026.1 GtrBI Not tested SHI-O Protein 4e-114 89
ESA_03027 YP_001439092.1 hypothetical protein Not tested Not named Protein 2e-108 87

• Homologs from VFDB (virulence genes)

GeneGenBank Accn Product ID of source DB Alignment Type E-val Identity
yfdH NP_459551.1 glycosyltransferase VFG0670 Protein 2e-114 89