Gene Information

Name : rph (STM3734)
Accession : NP_462634.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Unknown
Product : ribonuclease PH
Function : -
COG functional category : J : Translation, ribosomal structure and biogenesis
COG ID : COG0689
EC number : 2.7.7.56
Position : 3926679 - 3927395 bp
Length : 717 bp
Strand : -
Note : RNase PH; tRNA nucleotidyltransferase; forms hexamers in Bacillus subtilis; phosphoroltic 3'-5' exoribonuclease; involved in maturation of tRNA precursors and removes terminal nucleotides near CCA acceptor arms of mature tRNAs

DNA sequence :
ATGCGTCCAGCAGGCCGTAGCGCTAATCAGGTGCGTCCCGTAACCCTGACCCGTAACTATACAAAACACGCTGAAGGCTC
GGTACTGGTCGAATTTGGAGATACTAAAGTGTTGTGCACTGCCTCCATTGAAGAGGGCGTTCCACGTTTTCTGAAAGGAC
AAGGCCAGGGGTGGATCACCGCAGAGTATGGCATGTTGCCTCGCGCTACCCATACCCGTAACGCGCGCGAAGCGGCAAAG
GGTAAGCAGGGCGGCCGTACTATGGAAATTCAGCGTTTGATCGCGCGTGCGCTGCGTGCGGCGGTCGATCTGAAAACGCT
CGGCGAATTTACCATTACGCTGGACTGCGATGTAATCCAGGCCGATGGCGGTACGCGTACAGCGTCTATTACCGGTGCCT
GCGTGGCGTTGGCGGATGCGCTGAATAAATTGGTTGCCAACGGTAAGCTGAAAACCAATCCGATGAAAGGCATGGTGGCG
GCGGTTTCCGTAGGCATCGTTAACGGCGAAGCGATCTGCGATCTGGAATATGTTGAAGATTCCGCAGCAGAAACCGACAT
GAACGTCGTGATGACTGAAGACGGCCGTATTATTGAAGTACAGGGTACCGCGGAAGGCGAGCCGTTCAGCCATGAAGAAC
TTCTCACTTTGTTGGCGCTGGCCCGAGGGGGAATTGAATCCATTGTGGCGACGCAGAAGGCGGCGTTAGAAAATTGA

Protein sequence :
MRPAGRSANQVRPVTLTRNYTKHAEGSVLVEFGDTKVLCTASIEEGVPRFLKGQGQGWITAEYGMLPRATHTRNAREAAK
GKQGGRTMEIQRLIARALRAAVDLKTLGEFTITLDCDVIQADGGTRTASITGACVALADALNKLVANGKLKTNPMKGMVA
AVSVGIVNGEAICDLEYVEDSAAETDMNVVMTEDGRIIEVQGTAEGEPFSHEELLTLLALARGGIESIVATQKAALEN

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
rph YP_001800860.1 ribonuclease PH Not tested Not named Protein 1e-57 59