Gene Information

Name : yrbH (STM3315)
Accession : NP_462225.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Virulence
Product : D-arabinose 5-phosphate isomerase
Function : -
COG functional category : M : Cell wall/membrane/envelope biogenesis
COG ID : COG0794
EC number : -
Position : 3480962 - 3481948 bp
Length : 987 bp
Strand : +
Note : similar to Escherichia coli isomerase (AAC76229.1); polysialic acid capsule expression protein

DNA sequence :
ATGTCGCATTTAGCGTTGCAACCGGGGTTTGACTTTCAGCAGGCAGGCAAAGAGGTCCTGGAAATTGAACGTGAAGGCCT
GGCGGAGCTTGATCAATATATCAACCAGCATTTCACGCTGGCCTGTGAAAAAATGTTCAACTGCACCGGAAAAGTGGTGG
TCATGGGGATGGGGAAATCCGGCCATATCGGACGGAAAATGGCCGCCACGTTCGCCAGTACCGGCACCTCTTCCTTTTTT
GTACATCCGGGCGAAGCCGCGCACGGCGATTTGGGGATGGTTACGCCGCAGGATGTGGTTATCGCTATCTCCAACTCCGG
CGAATCCAGCGAGATCGCGGCGCTAATACCGGTACTTAAACGTCTGCACGTGCCGTTAATTTGCATTACCGGGCGACCGG
AAAGCAGCATGGCGCGTGCGGCAGATGTGCATCTGTGTGTTAAAGTGCCCAAAGAAGCGTGTCCGTTAGGACTGGCGCCT
ACCAGTAGTACCACCGCAACGCTGGTGATGGGCGACGCGCTCGCTGTGGCGTTGTTAAAAGCGCGCGGCTTTACCGCCGA
GGATTTCGCTCTGTCGCATCCTGGCGGCGCGCTGGGACGTAAGCTACTGCTGCGCGTAAGCGATATTATGCATACTGGCG
ATGAGATCCCGCATGTTAATAAACATGCCACCCTGCGTGATGCGCTATTAGAAATTACGCGTAAAAATCTCGGTATGACC
GTCATTTGCGATGAATCCATGAAGATCGACGGTATCTTCACCGACGGCGATTTACGTCGCGTATTCGATATGGGCGGCGA
TATGCGCCAGTTGGGGATCGCCGAGGTGATGACGCCAGGGGGCATTCGCGTGCGTCCCGGTATTCTCGCTGTCGATGCGC
TGAATTTAATGCAGTCCCGCCATATCACCTCCGTACTGGTTGCTGATGGCGACCAGTTACTCGGTGTGTTACATATGCAT
GATCTCCTGCGTGCAGGCGTCGTGTAG

Protein sequence :
MSHLALQPGFDFQQAGKEVLEIEREGLAELDQYINQHFTLACEKMFNCTGKVVVMGMGKSGHIGRKMAATFASTGTSSFF
VHPGEAAHGDLGMVTPQDVVIAISNSGESSEIAALIPVLKRLHVPLICITGRPESSMARAADVHLCVKVPKEACPLGLAP
TSSTTATLVMGDALAVALLKARGFTAEDFALSHPGGALGRKLLLRVSDIMHTGDEIPHVNKHATLRDALLEITRKNLGMT
VICDESMKIDGIFTDGDLRRVFDMGGDMRQLGIAEVMTPGGIRVRPGILAVDALNLMQSRHITSVLVADGDQLLGVLHMH
DLLRAGVV

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
kpsF CAE85210.1 KpsF protein Virulence PAI V 536 Protein 1e-46 41
kpsF AAZ04466.1 polysialic capsule transport protein Virulence PAI I APEC-O1 Protein 3e-47 41
kpsF YP_854329.1 polysialic acid capsule synthesis protein KpsF Not tested PAI I APEC-O1 Protein 6e-47 41