Gene Information

Name : umuD (STM1998)
Accession : NP_460949.1
Strain : Salmonella enterica LT2
Genome accession: NC_003197
Putative virulence/resistance : Unknown
Product : DNA polymerase V subunit UmuD
Function : -
COG functional category : K : Transcription
COG ID : COG1974
EC number : -
Position : 2081163 - 2081582 bp
Length : 420 bp
Strand : -
Note : binds with UmuC protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization

DNA sequence :
ATGGAATTTTTCAGACCTACAGAGTTGCGCGAAATTATTCCTCTCCCATTTTTCAGTTACTTAGTGCCGTGTGGATTCCC
CAGCCCCGCGGCGGACTACATTGAGCAGCGTATCGATCTTAATGAGTTGCTCGTTTCTCATCCCAGCTCAACATATTTTG
TCAAAGCCTCGGGGGATTCAATGATTGAAGCAGGCATCAGCGACGGTGACCTGCTGGTGGTGGATAGCTCACGGAACGCT
GACCACGGTGACATTGTAATTGCGGCAATTGAAGGAGAGTTCACCGTAAAACGGTTGCAGTTGCGCCCGACAGTGCAGTT
AATCCCCATGAACGGCGCCTATCGACCTATACCTGTCGGCAGTGAAGACACGCTCGACATATTCGGGGTGGTGACCTTTA
TCATTAAAGCGGTCAGTTGA

Protein sequence :
MEFFRPTELREIIPLPFFSYLVPCGFPSPAADYIEQRIDLNELLVSHPSSTYFVKASGDSMIEAGISDGDLLVVDSSRNA
DHGDIVIAAIEGEFTVKRLQLRPTVQLIPMNGAYRPIPVGSEDTLDIFGVVTFIIKAVS

• Homologs from PAI DB

GeneGenBank Accn Product Virulance or Resistance PAI or REI Alignment Type E-val Identity
t06650 YP_006892470.1 hypothetical protein Not tested SPI-7 Protein 3e-23 51
unnamed ABR13390.1 hypothetical protein Not tested PAGI-5 Protein 2e-20 50
rulA CAI36138.1 SOS-response transcriptional repressor Not tested PPHGI-1 Protein 3e-20 46