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Name : umuC (STM1997) Accession : NP_460948.1 Strain : Salmonella enterica LT2 Genome accession: NC_003197 Putative virulence/resistance : Unknown Product : DNA polymerase V subunit UmuC Function : - COG functional category : L : Replication, recombination and repair COG ID : COG0389 EC number : 2.7.7.7 Position : 2079892 - 2081160 bp Length : 1269 bp Strand : - Note : binds processed UmuD protein to form functional DNA pol V (UmuD'2UmuC); involved in translesion polymerization DNA sequence : ATGTTCGCGCTCTGCGATGTTAATAGCTTTTACGCCTCCTGCGAAACGGTCTTTCGTCCTGATTTATGTGGCCGACCGGT GGTGGTGTTATCAAACAATGATGGCTGCGTTATCGCGTGTAGCGCCGAGGCGAAACAGCTCGGTATCGCACCAGGTGAGC CATACTTCAAACAGAAAGAACGCTTCCGGCGATCCGGTGTTGTTTGCTTCAGCAGTAATTACGAGCTTTACGCTGATATG TCGAACCGGGTAATGACCACACTCGAGGAGATGGTGCCGCGGGTAGAAATTTACAGCATTGATGAGGCCTTTTGTGATCT GACGGGGGTACGAAACTGCCGGGATCTGACAGATTTCGGGCGCGAGATAAGAGCGACGGTCCTGAAGCGCACGCACCTGA CTGTCGGTGTAGGCATTGCCCAGACGAAAACCCTTGCCAAGCTGGCTAACCATGCTGCGAAAAAGTGGCAGCGCCAGACC GACGGGGTGGTTGACTTGTCGAACATCGATCGCCAGCGTCGGCTGCTGGCCCTGATACCCGTGGAGGATGTCTGGGGTGT CGGCAGGCGCATCAGTAAGAAGCTCAATGCCCTGGGCATCAAGACTGCTCTCGATCTCTCTGAACAAAGTACCTGGATCA TCAGGAAACACTTCAATGTCGTGCTGGAGCGTACCGTGAGAGAGCTTCGCGGAGAGCCATGTCTGGAGCTCGAAGAGTTT GCGCCGGCAAAGCAGGAAATCGTTTGTAGTCGCTCTTTCGGCGAGCGGGTCACAGACTATGAGGAAATGCGCCAGGCTGT TTACAGCTACGCTGCGCGCGCGGCAGAAAAACTCCGCGGCGAGCACCAGTACTGCCGTTTCATTTCAACATTCGTCAAAA CATCACCCTTTGCCCTGAACGAGCCCTACTACGGTAACAGCGCCGCGGTGACGCTTCTCACCCCCACGCAGGATTCACGT GACATTATCAATGCGGCTGTGAAATGCCTGGATAAAATATGGCGCGACGGCCATCGCTACCAGAAAGCGGGGGTGATGCT GGGTGACTTCTTCAGTCAGGGCGTAGCGCAACTCAACCTTTTCGACGATAACGCGCCGCGCGCCGGTAGTGCGAAGTTGA TGGAAGTACTGGACCATCTTAACGCAAAAGACGGGAAGGGGACGCTGTACTTCGCCGGGCAGGGGATGTCGCAACAGTGG GCTATGAAGCGAGAAATGCTTTCGCCTCGGTACACCACAAGATACTCTGATCTACTGCGTGTTAAGTAA Protein sequence : MFALCDVNSFYASCETVFRPDLCGRPVVVLSNNDGCVIACSAEAKQLGIAPGEPYFKQKERFRRSGVVCFSSNYELYADM SNRVMTTLEEMVPRVEIYSIDEAFCDLTGVRNCRDLTDFGREIRATVLKRTHLTVGVGIAQTKTLAKLANHAAKKWQRQT DGVVDLSNIDRQRRLLALIPVEDVWGVGRRISKKLNALGIKTALDLSEQSTWIIRKHFNVVLERTVRELRGEPCLELEEF APAKQEIVCSRSFGERVTDYEEMRQAVYSYAARAAEKLRGEHQYCRFISTFVKTSPFALNEPYYGNSAAVTLLTPTQDSR DIINAAVKCLDKIWRDGHRYQKAGVMLGDFFSQGVAQLNLFDDNAPRAGSAKLMEVLDHLNAKDGKGTLYFAGQGMSQQW AMKREMLSPRYTTRYSDLLRVK |
| Gene | GenBank Accn | Product | Virulance or Resistance | PAI or REI | Alignment Type | E-val | Identity |
| umuC | NP_807889.1 | DNA polymerase V subunit UmuC | Not tested | SPI-7 | Protein | 8e-123 | 63 |
| samB | NP_458681.1 | UV protection protein | Not tested | SPI-7 | Protein | 8e-123 | 63 |
| rulB | CAI36137.1 | nucleotidyltransferase/DNA polymerase | Not tested | PPHGI-1 | Protein | 6e-91 | 50 |
| unnamed | ABR13403.1 | DNA-directed DNA polymerase | Not tested | PAGI-5 | Protein | 2e-78 | 50 |
